| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_2730 |
|---|
| Symbol | |
|---|
| ID | 8598186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 2908242 |
|---|
| End bp | 2909357 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_003309506 |
|---|
| Protein GI | 269121329 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00606092 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA ATAAACAATT AACGAGGAGG CTGCAGACAA ACCTGCACAG GGTAGATAAG
CTTATTCTTT TAATCGTGTA TACACTTGTA GCAATAGGGA CTATTTTTAT CTATAGTGCT
ACAAAAGAGG ATCCCAAAAC ACAAAGTATA ATAGTAAAAC ATATTTTTTG GGTAGTGCTA
GGAACAGGAA CAATGATTGC TTTTACATTT TACGATTACA GAAAATTTGA AAAAAAAATT
CTGATATTAA TTGGTGTAAG CATAGGACTT CTTTTACTTG TAAAATTCGC CGGTCAGCAA
AGGCTGGGAG CTCAAAGATG GATTATGATA GGGCCGTTTT CATTACAGCC GTCTGAATTC
GTTAAAGTAA TGGTAATATT AATACTGGGT GCTTTTATTA CGAAAAATTA TAAAAACGGA
ATAAATAATA TACTGGATGT TATTGTTGTT TTTCTTCCAA TATCTGTTAT TACAGTGCTG
ATTTTAATAC AGCCGGATCT GGGATCAGCT CTTGCCATAA TTTTTATATT TTTATCTATG
ATTTTTCTAT ACGGGGTCAG ATTAAGACCG CTTATAGTAA TGGGACTGAT GGCATGTGTG
CTGGCAGTTC CTGTATATAT GTTCGGATTG AAATCGTATC AGAAAACCAG AATAACCACA
TTTTTGAATC CTGAACAGGA TATCAGGGGT GACGGCTGGA ATATAGTCCA ATCAAAAATA
TCAATAGGAG CCGGTGGACT GACAGGAACA GGAATTTTTA AGGGAAGTCA GAGCAGACTG
AGTTTTCTTC CGGAAGCTCA GACAGATTTT ATATTTTCTA TTATATCGGA AGAATTAGGA
TTTGTAGGGT CAGCTTCAGT AATAATTCTT TATTTCCTTC TTATATTTTT TATTCTGAGG
CCGAGTAAAG TGATAGAAAA CGAGTTTGGA AAAATGATCT TATATGGTGC AGCAAGTGTT
TTCTTTTTTC ATCTTATAGT AAATGTAGGA ATGACAATGG GGATGATGCC GGTAACAGGG
AAGCCGCTGC TGTTTCTAAG CTATGGCGGA AGTTCCTATA TTGCTTCATT TATGATTATA
GGACTGGTAC AGAGTGTAAA AATACATGTA GATTAG
|
|---|
| Protein sequence | MFKNKQLTRR LQTNLHRVDK LILLIVYTLV AIGTIFIYSA TKEDPKTQSI IVKHIFWVVL
GTGTMIAFTF YDYRKFEKKI LILIGVSIGL LLLVKFAGQQ RLGAQRWIMI GPFSLQPSEF
VKVMVILILG AFITKNYKNG INNILDVIVV FLPISVITVL ILIQPDLGSA LAIIFIFLSM
IFLYGVRLRP LIVMGLMACV LAVPVYMFGL KSYQKTRITT FLNPEQDIRG DGWNIVQSKI
SIGAGGLTGT GIFKGSQSRL SFLPEAQTDF IFSIISEELG FVGSASVIIL YFLLIFFILR
PSKVIENEFG KMILYGAASV FFFHLIVNVG MTMGMMPVTG KPLLFLSYGG SSYIASFMII
GLVQSVKIHV D
|
|---|
| |