Gene Sterm_2538 details

Gene Information

• Locus tag: Sterm_2538
• ID: 8597999
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 2699170
• End bp: 2699961
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 31%
• Product: integrase family protein
• Protein accession: YP_003309319
• Protein GI: 269121142

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA TTATAGAAGA ATATAAAAAT ACTCTTCAGA TGAAATTTTT TTCGCAGACT 
ACAATTAACG CATATATGGC GGATATAAAA AAGTTTTTGG AATTTCTTCC TGAAAAAAAT 
CTGGAGATTA TTCCAAAAGA GATTCATAAT TACAGAAAAT ATCTGAAAAA CAATTATAAA 
GTGAGTACAA TAAACAGAAA AGTAACTACT TTAAATAATT TTTTTAAGAG TCTGGGTATA 
GATGTAAGAT TAAAAGCAGA GAAAGTGCAC AGAATGAGTA TTAAAGATGA CTTTCTTACG 
GAAAGGGAGT ATAAAAGACT TCTGAAATTT GCTATTAACG AGAAAATCAG GATTACTATG 
GTGGTTCTGG CTCATACTGG AATAAGAGTA TCCGAACTCA AGTATATTCA TGTAGAAAAT 
CTGAAAACAG GTATAGTGGA AATAGAGAAT AAAGGAAAAA TCAGAATTAT AATTCTTTCA 
AAAAATTTGA TAAATATATT GAAAAAATAC TGCGGAGAAA GAAATATAAA AAGCGGAAGC 
ATAATCGAAG TAAGCAGGAT ATACATACAT AATTCACTGA AACAAAGTGC AGCCAATGCA 
CGCGGCGGTT TGAAAAAGAG CAAGGTACAT GCACATGCTT TCAGGCACTT ATTTGCTGTT 
CAGTTTTTGA AAAAGAATAA TAATATTGCT GCACTTGCAG ATATACTGGG ACATTCCTCA 
CTGGAAACCA CCAGAATATA TACAAGTCTG AATAAGAGAC AATTTCAGGA GATGCTGGAG 
GATATAATAT AA 

 

Protein sequence

MDKIIEEYKN TLQMKFFSQT TINAYMADIK KFLEFLPEKN LEIIPKEIHN YRKYLKNNYK 
VSTINRKVTT LNNFFKSLGI DVRLKAEKVH RMSIKDDFLT EREYKRLLKF AINEKIRITM 
VVLAHTGIRV SELKYIHVEN LKTGIVEIEN KGKIRIIILS KNLINILKKY CGERNIKSGS 
IIEVSRIYIH NSLKQSAANA RGGLKKSKVH AHAFRHLFAV QFLKKNNNIA ALADILGHSS 
LETTRIYTSL NKRQFQEMLE DII