Gene Sterm_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2239 
Symbol 
ID8597704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2368096 
End bp2368941 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content35% 
IMG OID 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionYP_003309024 
Protein GI269120847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0316603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA TACTGAAAAG AATAATCTTA CTATTTAACA TTTTTCTGAT ACTGGCCGGA 
TGTACATCTA TAACAGAAAA GGGCAGCAGG GTAATAAATA CAAGATCAGG AAGTGAACGT
GTAGACGGGC TGACTTATAA TTCCAAAGGT CAGAATTTCA GACAAAGATT CATAATACTT
CATTATACAG TTTCCGACAG GGAAAGATCA ATAGATCTTC TTACAAATAA AGACGTAAGC
TCGCATTATC TGATTACTGA CAGAGAGAAT GAACCCATAT ATTATCTTGT GGATGAAAAT
AAAAGAGCAT GGCATGCAGG AGTCAGCAGC TGGGGAAATT TTACTAATCT GAATGACAAT
TCCATAGGAA TAGAAATAGT GAATAAAGGT TTTATTCTGA AAGACGGAAA AATGGAATTT
TACCGGTATC CTTCATGGCA GATACATAAA ACTGCTGTTT TAGTACAGGA TTTAATAAAA
CGGTATGAAG TGGAACCACA GAATATACTG GGGCATTCTG ATATTGCACC GCAGAGAAAG
CAGGATCCGG GACCGCTTTT TCCTTGGGAG GAGCTGTACA GAGATTATGG AATAGGAATG
TGGTATGATG AAACAGATAA AGAAAAATAT AAAGATGCTT TTGATAACAG GATAACTCCT
GAAGAAGTCC AGAAAGAATT AAGAAAATTC GGATATGGGA TAGCGGTAAG CAAAGTATAT
GACGAACAGA CAAAGAATGT AATAACAGCG TTTCAGTTTC ATTTCAGACA GAATAAATAT
GATGGAATTA TGGATGCCGA GACATTTGCT GTTTTGAAAG CACTTAATGA AAAATACAAA
AAGTAA
 
Protein sequence
MRIILKRIIL LFNIFLILAG CTSITEKGSR VINTRSGSER VDGLTYNSKG QNFRQRFIIL 
HYTVSDRERS IDLLTNKDVS SHYLITDREN EPIYYLVDEN KRAWHAGVSS WGNFTNLNDN
SIGIEIVNKG FILKDGKMEF YRYPSWQIHK TAVLVQDLIK RYEVEPQNIL GHSDIAPQRK
QDPGPLFPWE ELYRDYGIGM WYDETDKEKY KDAFDNRITP EEVQKELRKF GYGIAVSKVY
DEQTKNVITA FQFHFRQNKY DGIMDAETFA VLKALNEKYK K