Gene Sterm_1941 details

Gene Information

• Locus tag: Sterm_1941
• ID: 8597408
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 2062526
• End bp: 2069317
• Gene Length: 6792 bp
• Protein Length: 2263 aa
• Translation table: 11
• GC content: 39%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003308728
• Protein GI: 269120551

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT ATAGAAGTGC ATTAATATGC TTACTGGCAT TTAATGCTGC GACTTTTACT 
TATAGTGCGT CAAATGTCAA TAGAAATACA TCTGAAAATT TGTATAATCA AATGACGAGA 
AATATAGAAA CAGGGAAAAG CAATGACTCA AACTATAAGC AAATAGAAAA AATATTGAAT 
AAAAAAAATA AAGAAATAAA AGATCTGTAT TTACAGGGAG ATTATATAGT AAAACCGGAA 
TATCTGGAAT GGCAGATATT TTTTAGCGGT TTCTATGCGG AAAGAAGAAA GGGAGATAAT 
ACATTAAATA ATGCGGATTA TTATTCAGAT CCTGATGAAA CTCCTACAAA GCCGATAAAC 
CCGCAGCCGC CTATAGATGT TAACATAGGA CTGGCAGTCT CTGTAAAGGC AATAGCCCCA 
AGAGACAGAA GGCTTGCTAT AACACTGCCG AATGAAATTA ATATAAATCC GACAGTTATT 
AATATACCAG TTCCGACAGC ATCTGCAGTC ATTGCAGTAA ATCCGCTGCA GTTTCAGCCG 
ATTTATCCGA GTATACCAGT GGTTAGTGTG AGTACAGTAA CACCGATCTC GTTTAATTTT 
CCCGGTTCTG CCAATAGTGA CGATCAGTAT TTCTTAAAGC AGAGTGCTGC TATTGCCCCT 
ATTTCCCAGC AAAATTTAAC AGGACAAGGA ACCGGAGGGA CTATGGATGT CATAAGCCGT 
TCATCAGTTT TGAATCAGGA TTTTGACATT TATGTTCAGG ATACTCATGC AGTAGGTGTA 
TCTGGCGGAG CAGCACACAG ATTGACAGAT AACGGAATAC AGAATACATC TGCTACAGGT 
TTGACTTCAT CGCATGCTGC TATGAAACTG ATAGGGGGGC ATACTGTAAC CATAGATAAT 
ATGGATTTTC GTATGGTAGG TGTGGGGAAT AAGCCGGGAG ACTATCTGAT GCTATTTCAT 
ACAGATGCTC ATGATGACGG TGGTGAAGCT GCAAAATGGA TAATTAATCC TAATACAACA 
ACAAAATTAT ACGGACAGCA GCTGATATTT TATGGAGTTC AGTCACATAA GACATATACT 
TATGGTGCAG ATATGATAAA TTACGGAAAT ATAGAAGCCT CGGCAGATAC CTCGGTGATT 
ACGGGAGGCG GAATCGAAAG CGGTTTAACC CCGCAGCAGA GAATAATATT TACTACAATA 
GATGCTAATG TAGGAAATAT AGTTTATTAT AATAGATATT TTAATTTTAT TAATGAAAAT 
GGAGCCAATA TAACATTAAA CGGAACTTCT GATGTGTTAG CCAATTATGC AACACCCGGA 
AATACAAACG GAGGAGCAAT TTTTACCAAT AACGGAAATG TGACTTTAAA CGGATTGAAT 
TCAATAGGAA TAATACTGAA TAGTTCGGTA AGTGATTTTG GTGATTCCAG AATAGTACTG 
AATAATCCTT TGGTATTAAA CGGTGATAAA TCAATAGGTA TACAGGCTAC GAATTCAATG 
ATAAATCTGG ATAATTCTGT AATAAAGGTA AACATCGGAA CAGCAGGAAA TGCAGCTAAT 
TCCACTGGAA ATGAGGCTGG TGGGGACGCT TCAAAAGTAG AAAATGCAAT AGGAATGGCT 
GTGGATTACA GCACAGCAAA TCCGCTCAGA ATGAGTAATT ATAATATATC TTTAGGAAAT 
GCAGCTAAAA ACAGCTCGGG AATTATAGTA CAAAACGGAA ATATAACTTT GGGATATGAC 
TCCGCGGCAG GGAAAACACA ATTGATAAGC AGTAACGGAG GTGTACAGAA TAATCTGCTT 
GTTGCCATAG GCTCGAATTC TTCGGCGACT ACAGAAGCAA ATACAACATT AAGCTTATTA 
AACGGTAATG GACAGGTCGG TATTTTTTCA AGTAACGGAG CGGCAATTAC TAACGGAGGT 
ACTCTGAATG CCAGTGGTAA CGGGACAATA GGAGTAATCA CAAATGACGG AACTGTTAAT 
AATACAGGAA ATCTGAATAT AAGCGGAGGA GTATACACTG ATCCTTCAAA CAATAAAATG 
GGAACTGTGG GAATAGCAGT TTTAGACAGC GGAGCAGGAA CTGCAAGCTT TACATCTTCT 
TCGGGAAATA TTCAAATAAA TGTAAACGGA CAGGAATCTA CAGGTTTATT CACAGATTCA 
GGTTTAGTAG ATATAACAGG CGGAAATATT CAGGCATCGG ACAGTGCTTT TAACCTTTAC 
TCAAAAGGTG CCACAGGAGT AATAAGATTA AGCGGAACTA CTCTGCGTAC TGGTCAGAGA 
TCATTGCTGT TCTTTAGTGA AGACGGTGGT ACTTTTGACT TGACAAATGT AAATGCAACA 
ATAGCAGGAG GGGCTGACAG CTCTTCAAGA GGAACTGCTT TTTACTACTC AGGAAACAAT 
ACACCATTGA CTAAGACAGA CCTTGAGAAT TATTTTCAGA CAACTTTCGG AGGTCTTACA 
GGTAAGCTGA CTTTAAATAT GGAGTCAGGC TCAAGATTAT TTATAGTAGA CAATATAATA 
ATGAATCTGA GTACAGCAGC AACTCCTTTG GGGTCACTTG CCAACGGACC GACAGTCATA 
GGAAGCAATT ATAAAACATA TATGATGTAT AAGGGAACTT TGATTATAGA TCAGAATGTA 
AATCTTGACT CAGCTGCAGA CCCTTATAAT ACACTAGAGC TGGCTACATC GCATATAAAT 
AATACATCAG CAACAGTTAC AGGAACACAG ACAGGACAAA TAGGAATGGC ACAGGAAAAC 
GGGCTTGATA CTTTGGGAGC TTCATTGCCG AGAAATCAGG TTACATTAAT AAATGATGCC 
GGAGCTTTTA ACTTGAGCGG TTCTAATTCT GTTGGAATAT ATGCAAGTAA CGGGGAAATA 
AGCAATATAA ACGGAGGAAA CCTTAATCTT ACAGGTAATG GTTCTATAGG GATGTATGCA 
GTAAATGGTA CAAAAGCAAT TAATGATAAT ACTTCAAATA TAGTGATCGG AACAAACGGC 
ATAGGAATAT ATGCCGAAGG ATTCAAACAG GGATCATCAC AGGCCTTCGG AAACGGAACG 
CTGGATATAA CAAATAACGG AAATATAACT GCACAAAGCG GCTCAGGGGC AATAGGGATA 
TTTCTTAATA ATAATTCAAC AGGAGTAAGA GGGGATACTA AACTTGATAT AAGCGGAGGA 
AATATAGATG TTCAGAATTC AGTGAACGGT GTAGGTGTAT ATATAAGCGG CGGTACACTG 
ACTTCGACTT CTCTGACTAC AATCAGCGTA GGTACAAACG GTATAGGGCT CTATGCAAAA 
AATTCAGATA TAAACTTATC TGATATAACA TTAAATTTAA ATGGTGATAA TGCTCTGGGA 
ATATACTTTG ACGGAGTATC AAACTTTACA GGTGCAGGAA CATTTAATAT AGACGGTAAA 
AATGTAGTGT TGTATAACAT GATTTCCGGC GGGGTAGTAA ATGCAAATAT AAATCTGGGT 
ACAGTAACAG CAGGGTCTTC ATATATCTTC GGGAGCCTGA TTGATCAGGT GGGAGTTTAT 
ACAGGAGATG CGAATTTAGC ATCAAACGGA AGCTTTCTGA TCGGAAAAAA TTCGGCAGCA 
TTTATGACAA ATACGAGCAG TATTACGGTA CAGCCAGGTT CTGTTAATAC AAGCGCCTTT 
GTATTGGACG GACAATATGC TATGCCTGCG GGGAGCAGTG CATATACAGG AATGACAGCT 
GATATGGACG GGGAAAATGC AGGTATTATA TCAGTAGATG ATTATTCTGC GGGAATATAT 
GGAAGAAACG GATCAAGACT GATTAATACA GGAACTATAT CAGTAGGAGA TTATTCAGCT 
GCGGTAGCAT CTTCAGGTGC CGGATCAATA GCAATAAATA ACGGAATAAT AAATCTAGGT 
TTAAGATCAA ATGCGCTATT TTTAAAAGAT GGTGTGAATA TAGAAAACAG AGCCTCAGGC 
GTTATTACAG GAAGTTCGGA TCATACAATA GCATTGTTTG CCGATAATGT AAGCGGTCCT 
ATAATAAATC AGGGATTGAT AACACTTACG GGAGATCAGT CAGCAGGTAT TTATTCAGTA 
GGTTCTGCGG TAAAAGTAAT AAATAACAGC GGAACAATTA CAGTTGGAGA TTCACTGGAT 
GCACAGAATC CAAGTATAGG AATATATACT GTTAATCCGG GAGATCAGAT TACGAATAAT 
AATCTTACTG CGGGTAATAA TTCAATGGGA ATCTACAGTG TAGGCGGACA GATAACACAA 
ACAGGCATAT TAAATATAGG AAATACCGGA GCGGGTGTAT ACGTAAGAGA CGGTTCGGTT 
AATATAACAG GTACTGCAGT ATTAAACTTA GGAACAGATA AAGCAGTAGG GGTATATGCC 
GAGAATTCGG CAGTAACAAA TGCTGCTGAT ATGAACATAG GAAATGAAAA CTTTGGTTTT 
GTGGTTTTAG ACGGTTCATT TTCAAATACA GCATCAAATA TAACAATGGG AACAGATTCT 
ATCTATTTGG TTAAAAGCGG AGCAGGTACA GTAACAAATG CTTCTGGAAC AACAGTGTCA 
ATGACAGGTT CTGAAAATTC GGCATTCTAT CTGCTAAACG GGGTAAATTT CGTAAATGAC 
GGAACTATTA CAGGAACAGC CGGAACAAGT AATGTGGGAG TACACAGCAG ATCAGGAACT 
GTAACAAATA ACGGAGCTAT AAATCTCGGA GCTTCAAACC TTGTATTCAA AACAAATTTT 
GACGGAAGTT ACACACTTGA TCCAAATGGA AATAAAATCG TAGATATAGA AAAAAGTTTG 
TTCACTGTGG GAGTGTATGG AACAGACTCA ACTCTTGTTA ATACATCAAC AGGAAATATT 
ACGGTTGGTG CCGGAGCTGT GGGAATAGCA GCTATTTCCG GTTCTGCAAG AAATGATGGT 
AATATAACAG CCACAGGTAA TTATTCGATG GGAATGTATA CTGAAAGAGC CAGAATAGTA 
AATAACGGAA CTATTAATGT AACAGGTGAT AATGTAATAG GGATGGCAGG AAACGGAGAA 
GGTTCAAAAA TAGAAAACTA CGGAACTATA AGAGTTTCCG GAACTCATGC AATAGGTATG 
TACGGCCTGT CGTCATCAGA AATAATAAAT GGCGGAACTA TAATAGCCGA CGGTGAAGGA 
GCTCAGGGAA TAGTTCTGGG GAACGGTTCG ACTCTTAATA ACCTTGTAGG AGGAACAATA 
ATAATAAACG GCGGAGTAGG TACGGGAAAT TATGGTGTAG GTGCCGGTGA AGTATATAAT 
ACTCCTACAA TTATAAATGC GGGTATAATA AAAGTAGCTG AAAAATTCAC TACAGATGGA 
GTAAATGTGG TGATAAACGT AGATCCTTCG ACAATAAAAG CACCGACAGC AGAAGATATA 
GCAGCAGGAA ATTATGATCC TTCAGACATA GGTGCTGATT ATCTGATATC AAATTCTGTC 
AGCATACAGG CTCCGGCCTT TGACGTGACT TCGCCGCTTC AGGTTTCAGG GAATTTTGCT 
GTAGGAACAA ATATGGAAAA ATATAAACTG GAAGATGTGA TAATACCTGA TTCTGGTTTC 
GCTGCTGACT CGGCTTCGAT ACCGGTACAG AGTAAATCAC TTACATGGAA AGCAATACCG 
GTGCTAAATT CAAGAGGAAA TCTGGATGTG TGGATGGAGA AAATACCATA TGATAACTTT 
ACAAACGGTC TGTGGTATCA GGACTTTGGA CGTGCATTAG ATGAGAAGTA CTTTAGAGCC 
GAAGGAAATG CATTGAAAAT ATACGATAAG CTTGATCTTT TGGAAAATGA GCTGGACTTC 
AGACATCTGA TGGCAAGTCT TGCAGGCGAT GTGTATGCTA ATATCAACCA GAGAGAGGAA 
GATATAGCCA GAACCTTTGA AAGCTCACTT GACCTTTTGC AAAACTCAAA AAATAATACA 
AAAGAAAATG TAAAAATAGA TGTAATTGTA GGAAAAGGTG AAAATAAGGA AAATACCGAC 
GGTGTACAAA GCTATAATTA TACTACAGCA GGAGTACTTG CACTGCGTGA AGTAGAGAGA 
ACATACAGAC ATACATTCGG CTACTCTCTG GGCTACCTTC ATACAAGCTT TGAATTCAAC 
GACGGAAACA ACAGTGAAGA ATGGGTGGAT ACTGTTCAGC TGGGAGTACA TAATAAATAT 
ACTGCGGACA GCTGGAAAAT AAAAAATGAC CTCACAGGAA GAGTAAGCTT TCATAATGTA 
GACAGAAACA TAGACTGGGG AGCCGGGAGC AAAAGATCTG AAATGAACGG TACTTATGAA 
ACTTATTCAA TAACATCTGA CAATATAATC GGAAAAGAGT TTGAAATAGG CAAAAAAACA 
GTTATAACAC CATACGGAGG ATTAAGAGCC ATGTATATAA CAAGACCTAC ATTTGATGAA 
AGCGGGCTGG AAGCAGTGGA AGTAAAGGGT AATGATGCCT GGAGCGTAAA ACCCAGAGCA 
GGAATAGAGC TGAAAGCATC AACACCGCTA AGTCCGAAAA GTGAATGGAA ATTAAAGGGA 
ACTTTGGATC TGGCATATGA ATATGAGCTT GCTGATCTGA ATGAAAGAGA AAAAGCAAGA 
CTTACAGCAA TAGAAACAGA CTATCATGAT TTATCAAAAC CTATGGATGA AAAAGGAGCA 
TTTAGAAGCA AGGCATCTGT GGGTGTGGAA GTGGAGAACA GATACGGTAT TTTCCTTACA 
GGTGAATATG TGGTAGGAAA TGACAATCAG GATGATTACA GGGCAGGAGT ATCATTAAAA 
GCTGTATTTT AA 

 

Protein sequence

MKKYRSALIC LLAFNAATFT YSASNVNRNT SENLYNQMTR NIETGKSNDS NYKQIEKILN 
KKNKEIKDLY LQGDYIVKPE YLEWQIFFSG FYAERRKGDN TLNNADYYSD PDETPTKPIN 
PQPPIDVNIG LAVSVKAIAP RDRRLAITLP NEININPTVI NIPVPTASAV IAVNPLQFQP 
IYPSIPVVSV STVTPISFNF PGSANSDDQY FLKQSAAIAP ISQQNLTGQG TGGTMDVISR 
SSVLNQDFDI YVQDTHAVGV SGGAAHRLTD NGIQNTSATG LTSSHAAMKL IGGHTVTIDN 
MDFRMVGVGN KPGDYLMLFH TDAHDDGGEA AKWIINPNTT TKLYGQQLIF YGVQSHKTYT 
YGADMINYGN IEASADTSVI TGGGIESGLT PQQRIIFTTI DANVGNIVYY NRYFNFINEN 
GANITLNGTS DVLANYATPG NTNGGAIFTN NGNVTLNGLN SIGIILNSSV SDFGDSRIVL 
NNPLVLNGDK SIGIQATNSM INLDNSVIKV NIGTAGNAAN STGNEAGGDA SKVENAIGMA 
VDYSTANPLR MSNYNISLGN AAKNSSGIIV QNGNITLGYD SAAGKTQLIS SNGGVQNNLL 
VAIGSNSSAT TEANTTLSLL NGNGQVGIFS SNGAAITNGG TLNASGNGTI GVITNDGTVN 
NTGNLNISGG VYTDPSNNKM GTVGIAVLDS GAGTASFTSS SGNIQINVNG QESTGLFTDS 
GLVDITGGNI QASDSAFNLY SKGATGVIRL SGTTLRTGQR SLLFFSEDGG TFDLTNVNAT 
IAGGADSSSR GTAFYYSGNN TPLTKTDLEN YFQTTFGGLT GKLTLNMESG SRLFIVDNII 
MNLSTAATPL GSLANGPTVI GSNYKTYMMY KGTLIIDQNV NLDSAADPYN TLELATSHIN 
NTSATVTGTQ TGQIGMAQEN GLDTLGASLP RNQVTLINDA GAFNLSGSNS VGIYASNGEI 
SNINGGNLNL TGNGSIGMYA VNGTKAINDN TSNIVIGTNG IGIYAEGFKQ GSSQAFGNGT 
LDITNNGNIT AQSGSGAIGI FLNNNSTGVR GDTKLDISGG NIDVQNSVNG VGVYISGGTL 
TSTSLTTISV GTNGIGLYAK NSDINLSDIT LNLNGDNALG IYFDGVSNFT GAGTFNIDGK 
NVVLYNMISG GVVNANINLG TVTAGSSYIF GSLIDQVGVY TGDANLASNG SFLIGKNSAA 
FMTNTSSITV QPGSVNTSAF VLDGQYAMPA GSSAYTGMTA DMDGENAGII SVDDYSAGIY 
GRNGSRLINT GTISVGDYSA AVASSGAGSI AINNGIINLG LRSNALFLKD GVNIENRASG 
VITGSSDHTI ALFADNVSGP IINQGLITLT GDQSAGIYSV GSAVKVINNS GTITVGDSLD 
AQNPSIGIYT VNPGDQITNN NLTAGNNSMG IYSVGGQITQ TGILNIGNTG AGVYVRDGSV 
NITGTAVLNL GTDKAVGVYA ENSAVTNAAD MNIGNENFGF VVLDGSFSNT ASNITMGTDS 
IYLVKSGAGT VTNASGTTVS MTGSENSAFY LLNGVNFVND GTITGTAGTS NVGVHSRSGT 
VTNNGAINLG ASNLVFKTNF DGSYTLDPNG NKIVDIEKSL FTVGVYGTDS TLVNTSTGNI 
TVGAGAVGIA AISGSARNDG NITATGNYSM GMYTERARIV NNGTINVTGD NVIGMAGNGE 
GSKIENYGTI RVSGTHAIGM YGLSSSEIIN GGTIIADGEG AQGIVLGNGS TLNNLVGGTI 
IINGGVGTGN YGVGAGEVYN TPTIINAGII KVAEKFTTDG VNVVINVDPS TIKAPTAEDI 
AAGNYDPSDI GADYLISNSV SIQAPAFDVT SPLQVSGNFA VGTNMEKYKL EDVIIPDSGF 
AADSASIPVQ SKSLTWKAIP VLNSRGNLDV WMEKIPYDNF TNGLWYQDFG RALDEKYFRA 
EGNALKIYDK LDLLENELDF RHLMASLAGD VYANINQREE DIARTFESSL DLLQNSKNNT 
KENVKIDVIV GKGENKENTD GVQSYNYTTA GVLALREVER TYRHTFGYSL GYLHTSFEFN 
DGNNSEEWVD TVQLGVHNKY TADSWKIKND LTGRVSFHNV DRNIDWGAGS KRSEMNGTYE 
TYSITSDNII GKEFEIGKKT VITPYGGLRA MYITRPTFDE SGLEAVEVKG NDAWSVKPRA 
GIELKASTPL SPKSEWKLKG TLDLAYEYEL ADLNEREKAR LTAIETDYHD LSKPMDEKGA 
FRSKASVGVE VENRYGIFLT GEYVVGNDNQ DDYRAGVSLK AVF