Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1629 |
Symbol | |
ID | 8597098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1733226 |
End bp | 1735877 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | valyl-tRNA synthetase |
Protein accession | YP_003308418 |
Protein GI | 269120241 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAT TGAGTAAAAG CTATTCACCT AAGGAAATAG AAGAAAAATG GTATAAGGTA TGGGAAGAAA ATGGATATTT CAGTGCCCAG CATAATGATG AAAAGCCGGG ATATTCAATA GTAATACCGC CGCCAAATGT AACAGGGATT CTTCATATGG GGCATATACT GAATAATTCA ATACAGGATA CAATGATAAG ATGGAAGAGA ATGTCCGGAT TCGATGCTTT GTGGATGCCG GGAACAGATC ATGCCGGAAT AGCAACACAA AATAAAGTGG AAAAATGGCT TATGGAAGAG GGTACTACAA AAGAAGAAAT AGGAAGAGAA AAGTTTCTGG AAAGAACATG GGAATGGAAA GAAAAGCACG GAGGAATAAT AACAAAGCAG CTGAGAAGGC TTGGCTCGTC ACTTGACTGG AAAAGAGAAA GATTTACCAT GGATGAGGGT CTTTCTGATG CTGTAAAGGA TGTTTTCATA AGATTATATA ATGATGATCT GATATATAAA GGCGAATATA TAGTTAACTG GTGTCCGAAA GATAAAACGG CGCTTGCTGA CGATGAGATA GAGCATGAAG AGGTAACAGG AAAAATATGG CAGATAAAAT ATCCTGTAAA AGACAGTGAT GAATCTCTCA CTATTGCTAC TACAAGACCT GAAACTATGC TGGGGGATAC AGGAGTTGCC GTAAATCCAA ATGACAGCAG ATATAAGCAC CTGATTGGCA AAAGTGTGAT ACTTCCTCTT ATGAACAGAG AGATACCAAT AGTAGCAGAT GAATATGTAG ATATGGAATT CGGAACAGGT GCGGTAAAAA TGACTCCGTC ACATGATCCG AATGACTTTG AAGTAGCTAA AAGAACTAAT CTTCCTTTGC TGAATGTAAT GGAGGAAGAC GGAAGCATAA ATGAAAACGG CGGAAAATAC AAAGGGCTGG ACAGATTTGT TGCCAGAAGA GAGGTTCTTA AGGATCTGGA AGAGCTGGGA CTTCTTGTGG AAGTAAAAGA ACACCATCAC TCAGTAGGAC ATTGTTACAG ATGCGGTACT GTTATAGAGC CCAGAGTTTC TAACCAGTGG TTCGTAAGAA TGCAGCCTCT CGCCAAAAAA GCACTTGAGG TGGTAAGAAA CGGAGAAATA ACAATATCAC CGCAGAGATG GATAAAAGTA TATTATAACT GGCTTGAAAA TATAAGAGAC TGGTGTATCT CAAGACAGCT TTGGTGGGGG CACAGAATTC CCGCGTATTA TTCCGAGGAC GGGACTATAT TTGTAGCAAA ATCACTTGAA GAAGCAAAAC AGCAGGCTAA GGAAAAATAT GGAAAAGAAG TGGAGCTTAG AGAGGAAACA GATGTACTTG ATACATGGTT TTCATCACAG CTGTGGCCTT TTTCCACTAT GGGCTGGCCT GAAAAAACAA AAGATTTTGA GAAGTTTTTC CCTACAGATG CACTGGTAAC AGCTGCAGAT ATTATATTTT TCTGGGTATC AAGAATGATA ATGATAAGTG AATACTTATT TGATGAAATC CCGTTTAAAT ATGTATACTT AAACGGAATA GTAAGGGATG AAAAAGGTAG AAAAATGAGT AAAACTTTGG GGAATTCGCC TGATCCGCTT GATCTTATAG ACAAATACGG GGCAGATGCG ATAAGATTCA GCCTTCTGTA TAATACTTCA CAGGGGCAGG ATATCTTCTT CTCTGAAAAG CTTCTGGAAA TGGGAGCAAA TTTTTCTAAT AAAGTATGGA ATGCATCAAA ATTTGTTCTT CAGAATCTGG AGGATTTTGA TTATAAAACA TCAATATCAG ATCTTGAATT TAAACTGGAA GACAGATGGA TACTGTCAAA ATTACAGAAT GCAGCAAAAG GTGTAAATAA TGCACTTGAT GGATATGAGC TTGATATGGC TGCAAAAACA GCCTATGAAT TTTTCAGGGG TGAATTCTGT GACTGGTATG TGGAAGCTGC AAAAACAAGA GTATACGGCG GAGATGAACA GGATAAGAAA ACTGCACAGT GGGTGCTTAG ACATATACTT GATAACGGAT TAAAGCTGCT TCATCCTTTT ATGCCGTTTA TAACAGAGGA ATTATGGCAG AAAGTAAAAC TTGACGGTGA AACAATAATG CTTTCAGATT TTCCTAAGTA TGACGAAGCT CTTCTGGATA AGGAAGCAGA AGAGGAATTC GACTATCTGA AGGAAGTAAT TACAGCTATC AGAAATATCA GAGGTGAGGT AAATGTACCG CCTTCAAAGA AAATAGAAGT TATATTTAAA ACAAATAATG AGAGTGAAAG AAATGTTCTT GAGAAAAATG CAAAAATACT TGATAAGCTC TCTAATGTAG AAAAATATAC TATAGACAAT GAAAGAAAAA TACCAAAACT CACAGGATTC AGACTTGCAG ATAATACTGA GATATTTGTA CCGCTTGCAG GTCTCATAGA TACTGAAAAA GAAACTGCAA AACTGAAAAA GGATATAGAA AAGACAGAAA CGGAATTAAA AAGAGTCCTT GGCAAACTTT CCAATGAAAA ATTCCTCAGC AAAGCACCTC AGGATGTAGT GGATAAGGAA AATGGAATCA AGGAAGAGCT GGAAAATAAG CTTGCCAAGC TTAGGGAAAA TCTGGAGTTA TATAAAGACT AG
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Protein sequence | MSELSKSYSP KEIEEKWYKV WEENGYFSAQ HNDEKPGYSI VIPPPNVTGI LHMGHILNNS IQDTMIRWKR MSGFDALWMP GTDHAGIATQ NKVEKWLMEE GTTKEEIGRE KFLERTWEWK EKHGGIITKQ LRRLGSSLDW KRERFTMDEG LSDAVKDVFI RLYNDDLIYK GEYIVNWCPK DKTALADDEI EHEEVTGKIW QIKYPVKDSD ESLTIATTRP ETMLGDTGVA VNPNDSRYKH LIGKSVILPL MNREIPIVAD EYVDMEFGTG AVKMTPSHDP NDFEVAKRTN LPLLNVMEED GSINENGGKY KGLDRFVARR EVLKDLEELG LLVEVKEHHH SVGHCYRCGT VIEPRVSNQW FVRMQPLAKK ALEVVRNGEI TISPQRWIKV YYNWLENIRD WCISRQLWWG HRIPAYYSED GTIFVAKSLE EAKQQAKEKY GKEVELREET DVLDTWFSSQ LWPFSTMGWP EKTKDFEKFF PTDALVTAAD IIFFWVSRMI MISEYLFDEI PFKYVYLNGI VRDEKGRKMS KTLGNSPDPL DLIDKYGADA IRFSLLYNTS QGQDIFFSEK LLEMGANFSN KVWNASKFVL QNLEDFDYKT SISDLEFKLE DRWILSKLQN AAKGVNNALD GYELDMAAKT AYEFFRGEFC DWYVEAAKTR VYGGDEQDKK TAQWVLRHIL DNGLKLLHPF MPFITEELWQ KVKLDGETIM LSDFPKYDEA LLDKEAEEEF DYLKEVITAI RNIRGEVNVP PSKKIEVIFK TNNESERNVL EKNAKILDKL SNVEKYTIDN ERKIPKLTGF RLADNTEIFV PLAGLIDTEK ETAKLKKDIE KTETELKRVL GKLSNEKFLS KAPQDVVDKE NGIKEELENK LAKLRENLEL YKD
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