| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1528 |
|---|
| Symbol | |
|---|
| ID | 8596998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1623621 |
|---|
| End bp | 1624415 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003308318 |
|---|
| Protein GI | 269120141 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA TTTGTACACA GGATCAGGCT TTTTTGCCGA GAGAGCTGAA AGAAAGATTT
CAAAAAGTAC AGGATATGGG GTTTGACGGT TATGAAATAG ACGGAGCATT ATTGCTTAAT
AATCTTGATG AAGTAAAAGA AGCCATAAAG GAAACCGGAC TTCCCGTAGT AAGTGCATGC
GGAGGATACA GAGGCTGGAT AGGCGATTTT ATAGAAGAAA GAAGATTAAA TGGGATAGAG
GATATACAAA AAATACTGGA AGCTCTGCAG GAGATAGGTG GAAAAGGAAT TGTAGTTCCG
GCAGCATGGG GAATGTTTAC TTTCAGACTG CCTCCGATGC AGTCTCCGAG AAGTGCAGAG
GGTGACAGAA AGGCAATACT GGATTCATTA AAAATATTGG ATAAAAAGGC AGGAGAAACA
AATACTGTCA TATTTCTTGA GCCTCTTAAC AGATATCAGG ATCATATGAT AAATACTCTT
GCAGCAGCAA GAAGTATAAT AGAAGAAGGA AAATTTCAGA ATGTAAAATT AATAGCTGAT
GCATATCATA TGAACATAGA TGAGGATAAT ATGTTTCAGT CACTTATAGA TAATAAGGAT
ATGGTAAAAC ATATACATAT TGCGGAAAAT CACAGATTTC AGCCGGGATC GGGAAGCATG
GATTTTAAAA AGCTGTTTAA GACTCTGAAA GATATAAATT ATGACGGATA TGTGGTCTAT
GAATGCAGAA TAAGGGGTGA AAATCCTGAA AAAGAATATC AGAAATCACT GGAATATCTA
AAAAGCTGTG AATAG
|
|---|
| Protein sequence | MFKICTQDQA FLPRELKERF QKVQDMGFDG YEIDGALLLN NLDEVKEAIK ETGLPVVSAC
GGYRGWIGDF IEERRLNGIE DIQKILEALQ EIGGKGIVVP AAWGMFTFRL PPMQSPRSAE
GDRKAILDSL KILDKKAGET NTVIFLEPLN RYQDHMINTL AAARSIIEEG KFQNVKLIAD
AYHMNIDEDN MFQSLIDNKD MVKHIHIAEN HRFQPGSGSM DFKKLFKTLK DINYDGYVVY
ECRIRGENPE KEYQKSLEYL KSCE
|
|---|
| |