| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1519 |
|---|
| Symbol | |
|---|
| ID | 8596989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1609969 |
|---|
| End bp | 1614363 |
|---|
| Gene Length | 4395 bp |
|---|
| Protein Length | 1464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | outer membrane autotransporter barrel domain protein |
|---|
| Protein accession | YP_003308309 |
|---|
| Protein GI | 269120132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.796845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAATATTAAT GTCAATACTC GGAACATTGT CTAGTCTTGG GAATGCACAG
ATTACAGTTA ATACATCCTC TGATACTAAA AATATAACTA CTAATACACA AACAACAGAT
GATATGATAA TTACCGGAGA AGGACCGTTC ACTGCCGGCG GGAACAACGG AAATCCCGAT
CCTAACTGGT ATTTACAGGG ATATAAGGTA AATAACGGGG CAGTTCTTGA AAATGTAAAT
AAAATTGATT TAAATGCAAA ATATGATAAC GGTGTTTTGA TTAGCAATAA TTCAGGTCTA
GTTAATTCCG GAACAATCAG TCTGAACAGC ACTAATGGCG TAGGAGTTTT ATCGTCTGAC
GGAACAGGAA ATATAGTAAA CTCTTCTAAT GGTGTTATAA AGTTAACAAC AGGAATAGGA
ATCGCCACAA AAGGTTATTC CGGTCCCACA TTTACAGGGA CTATCAGAAA TGACGGTCAA
ATATTGTCTA CAGCGGGAGG AACAGGAATA TTTACATATG GAAGTCAGTA TGTACCCGGC
GGGACAGTGG AAAATAACGG AATAATAAGT GTGAGCGGAG GAACAAACGC TACAGGTGTT
TCAATAAGGG GTTTCACCAC ATTTACCAAT AATGAAACAG TATCTGGTTC AGCTTCAGCC
AGTTCGTCTT TTGGTGCTTT GGTTACAGGA GACAGCGGGG CTCAGCTTAT AAACTCGTCA
ACCGGAGAGA TAATCGGGAA AAATTATGCC AACGGAATGT ATGCTGCCAA TAATTCTGCT
ACTAATCAGA CATTTGCAAG AAATGACGGA ACTATAGTTG TAGATAAAGG TTATGGTATA
TATGCAATTT CTTCAAAAGC AGAAAATAAC GGAACAATAT ATTCGAATAA TATAGGAATA
TATGCAACTA AATATTCAGG GACATCCCCG GTTTCTGTTA TTTCAAATAA CGGAACTATA
GTAATAGGAA ATAACGGGAT CGGAATGCAG CTAGGACAGG CAATAGGGAA AAATACCGGG
GAAATAGTTA TTGCCGGAAA TAATGTAATA GGTGCATATA TATTCGGCGG AAGTAATTAT
GAGGGAAGTC TTACAAATTA TCATGATATA AGCTCTGATG CAGATAAGAC AGGGGTTATT
CTGATAAAAC TCAGCGGAAG TACAACAGCA GGAGATAAAA CAGCACATAT ATATAATAAT
GCTTCATTAA CAGCATTAGG TGATAATTCG ATTGCTATCT ATTCTATAAG TAACGGTAAA
ATTCATAATA CGGGAAATAT AACTGTAAAT AACGGAATTG GTATAAAATT GGAGAATTCT
TCGTTGAATA ACGGTGATAA TACCGGTGTT ATTACAGTAA AAGGGAGCGG AATCGGAATT
TTGGCGGGTG CTTCTAACTA TAACGGTTCC GTACTAAATA ACGACGGGAA GATAATACTT
GAAAATAACG GGACAGGTAT TTATGTTTCT TCAGGAAACA CTTATATGAA TGGAACAACA
GGAACAAATG CCGGAACAAT AGAGTTCAGC GGAGACGGCG GGACAGGTAT TTATGTAACA
GATACTAAAT CATCATTTAC AAACAATGCA GATATCACAT CATCAGGGAA AAATACTACA
GGTATGTCTG CTGTGAATTT TGCAAGCATA ACAAATACAG GTAATATGAA TCTTTCAGGA
GAAGGCTCTG TAGGACTGAA TATAGCCGGC GACGGAAAGC TGCTGTCTAA TACGGGAAAT
CTGACTGTAG ATAACGGAAT AGGAATAAAA GTAAGCAATT CTAAAATAGA AGCAGGACAA
AATACGGGTG CTATCACTGT CAGCGGTGAA TCTGGCGCAG GAATAGCCGG TATAAACTCA
AAAATTATCA ATAACGGTAA AATTTATGTG AATGATATGG CTCTTGGAAT ATACAGCAGT
AATTCTGAAG TGACAAGTGC AGGAGAGATA GAGATAACAG AAGGTACAGG AATAGGAGCT
GAAACTGGCA GTAAAATTAC AAATGAGGCT TCAATAGAAA TCTCGGGATC AGGTACAGGA
ATAAAATCTG CCGGTTCTAT AATAGCAAAT AAAAATACAG GCGAAATATC TGTAGTTAAA
GGAACTAATA TAGAAGCAAG TGATTCACTG GTAACAAATA ATGCAGTTTT GAGCAATAAA
GACGGAACAG GAATACTTGG CAGAAATACA GAGATAATAA ATAATGGAAA TTTACAGATA
GAAAAAGGTA CAGGTATTTC TGCATTGAGT AATAGTCTGT TGACAAATAG CGCAGAAATA
AATGTAACAA CAGAAGGAGC AGGAATAAAA GCTTCAAATT CAGAGATAAA TAATAATAGT
AACGGAACAA TAACTGTCAC AAAAGGAGTT AATATTGATT TATCAGAATC AGTTTTGGAA
AATGCTGCGT TATTAAGTAA TTCAGATGGT ATAGGAATAA AAGCTGATAA TTCAACAGTG
AAGAATACAG GAAATATAGA TATAACAAAC GGAACAGCCA TAGAAGCTTT GAATAACAGC
AGTATTTTGA ATACAGCTTA TTTGAAGAGC GGCAATACCG GAATAAATAC TTCGAATTCA
ATACTATTAA ATGAAGGAAA AATCGATGCA GCAGAAACTG GAATTTATGC ATCGGATAAC
ATAAAAACTG TAAATACAGG AGAAATAAAA GGTAAAACTG GTGTAGAAAT AATTTCCGGG
ACAGAAGAAT ACAGCGGCCA CTTTTTGAAT ACAGGAAAGA TCACAGGTAC AGATTATGCC
GTGAAATTTG ATAATAATAA TAGTGTATTT GAACTGGGGA GCGGAAGTAT CATAAACGGA
AAAATTGATG CCTCAGGCGG AGAAAATGTA TTAATAGTAA ATGGAACTGT AAATATAGAC
AGTGCTGATA ATTTTAATAA AATAGTAAGC AGAGGGGATT CTGTTATTTC CGGAATCGTT
AATTTGAATC CTGCTGCAGA TGACAGTTAT TATACAGAAG CTTTTTCTGC GAAAAAGAGT
ATGGCGGATA TGGCATCTGA AACAGAGCTG GGAGAATTAA CAGTATCAGG AGTGGTAAAT
GTAGGCGTAA ATTATGACGG CATAGTTGAT GAAACAGATA AAACAGGAAA AATTATAGCA
GCAAGTCTAA ATTTACAAAA CGGAAAAATA GTTTTGAATA ATGCAGGAAG TACGGTAAAT
GATATTGCTA AAGAATCAGG ACTGACTAAT TACGGAGACC AGATCAGAGT AAAAAGTATA
GTAGTATCAA ATAAACAACA GGCAGTAGAC CCGTCTTTCC AATTTCAGTC AACTGGCGGA
ATGAATGAAG CAGAAGGGTG GACAAGAGAA ACAGTAGCAA GGATAGAAAA CGGCGTTACA
GTATTAGATG CATTATATAC TAATCTTAAT AAAGAAGTTC CTGTAACACC TACACCAGAA
CCTGCACCAG AACCGACACC GGATCCCGCA CCTGTACCAA ATCCCAAACC CACAGCGGCT
GAAAAAACAA ATGCGGTTCC CAGAAACAGG ATTGATCTTG ATAATCTAAA CAGACTGGAC
AGTATATCGG GAAGTTTTCT TTCAATGGAA GCAGACAGTA TGAATGCCGG TGAAAGAAGA
CAGTCAGTGG AATATACGGG AACAAAAGCA GGATCAAATT TCAAGGCAAG CAACAGCCTT
AATTATGACT ATGATGCTGA TTCTGACGGA ATAGCAGGAA CAACTCTTTA TAAACATACA
GACAGCTTAT ACAGCGGATT TACTTTAGGA TATTCAGATA ATAAGGTAAA TTATGATAAC
GGAGATGATG AAAAAATAAG TTCGGCAGGA ATAAATATAT TTGGAAGATA TAAAACAGGG
AACTGGAATT TTGACGGGCA TTTTGGATAC AGCTATAATG AACATGAGCT GAATGCAGAC
TGGCTTATGG CAGGAAGAAA AGAGAGCAAT TATAATTCAC ATGTAATAAA AACAGGAGTA
TCGGCAAGCT ATGACCAGAA TCTGGGAAAT ACAGGACTGG TATTGACTCC GTCAATAGGT
GCAGATTATA TAATGGTGAA TGAGGAAACA ATAAGAACAG ACGGAATGGC AAATATAGAA
GGTGCACACG GGAACGGTGC AGCAGGGAAA ATAGGACTTC ATCTCGGCAA TACTGCCGGA
AATTTCAGAT GGTTAGCCGG AATAGGGTAT GAACAGAATT TTACAGATAC TTTTCACAAA
GAGAGAAAAA TGCTGAATAA TTATACAATG GAAGAACTGC ATTATGGAAA AGGAACTTTC
AATGCTAATT TAAATATGGA TTTTAAAGTA ACTGATAAAT TTACTCTGAA AACAGGCTAT
GAATACGAAA ATAACAGTAA TTATGAAAAT CATAAAATTA ATGCAGGTAT TTCGTTTATA
CTTGGTGAAA AATAA
|
|---|
| Protein sequence | MKKIILMSIL GTLSSLGNAQ ITVNTSSDTK NITTNTQTTD DMIITGEGPF TAGGNNGNPD
PNWYLQGYKV NNGAVLENVN KIDLNAKYDN GVLISNNSGL VNSGTISLNS TNGVGVLSSD
GTGNIVNSSN GVIKLTTGIG IATKGYSGPT FTGTIRNDGQ ILSTAGGTGI FTYGSQYVPG
GTVENNGIIS VSGGTNATGV SIRGFTTFTN NETVSGSASA SSSFGALVTG DSGAQLINSS
TGEIIGKNYA NGMYAANNSA TNQTFARNDG TIVVDKGYGI YAISSKAENN GTIYSNNIGI
YATKYSGTSP VSVISNNGTI VIGNNGIGMQ LGQAIGKNTG EIVIAGNNVI GAYIFGGSNY
EGSLTNYHDI SSDADKTGVI LIKLSGSTTA GDKTAHIYNN ASLTALGDNS IAIYSISNGK
IHNTGNITVN NGIGIKLENS SLNNGDNTGV ITVKGSGIGI LAGASNYNGS VLNNDGKIIL
ENNGTGIYVS SGNTYMNGTT GTNAGTIEFS GDGGTGIYVT DTKSSFTNNA DITSSGKNTT
GMSAVNFASI TNTGNMNLSG EGSVGLNIAG DGKLLSNTGN LTVDNGIGIK VSNSKIEAGQ
NTGAITVSGE SGAGIAGINS KIINNGKIYV NDMALGIYSS NSEVTSAGEI EITEGTGIGA
ETGSKITNEA SIEISGSGTG IKSAGSIIAN KNTGEISVVK GTNIEASDSL VTNNAVLSNK
DGTGILGRNT EIINNGNLQI EKGTGISALS NSLLTNSAEI NVTTEGAGIK ASNSEINNNS
NGTITVTKGV NIDLSESVLE NAALLSNSDG IGIKADNSTV KNTGNIDITN GTAIEALNNS
SILNTAYLKS GNTGINTSNS ILLNEGKIDA AETGIYASDN IKTVNTGEIK GKTGVEIISG
TEEYSGHFLN TGKITGTDYA VKFDNNNSVF ELGSGSIING KIDASGGENV LIVNGTVNID
SADNFNKIVS RGDSVISGIV NLNPAADDSY YTEAFSAKKS MADMASETEL GELTVSGVVN
VGVNYDGIVD ETDKTGKIIA ASLNLQNGKI VLNNAGSTVN DIAKESGLTN YGDQIRVKSI
VVSNKQQAVD PSFQFQSTGG MNEAEGWTRE TVARIENGVT VLDALYTNLN KEVPVTPTPE
PAPEPTPDPA PVPNPKPTAA EKTNAVPRNR IDLDNLNRLD SISGSFLSME ADSMNAGERR
QSVEYTGTKA GSNFKASNSL NYDYDADSDG IAGTTLYKHT DSLYSGFTLG YSDNKVNYDN
GDDEKISSAG INIFGRYKTG NWNFDGHFGY SYNEHELNAD WLMAGRKESN YNSHVIKTGV
SASYDQNLGN TGLVLTPSIG ADYIMVNEET IRTDGMANIE GAHGNGAAGK IGLHLGNTAG
NFRWLAGIGY EQNFTDTFHK ERKMLNNYTM EELHYGKGTF NANLNMDFKV TDKFTLKTGY
EYENNSNYEN HKINAGISFI LGEK
|
|---|
| |