| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1413 |
|---|
| Symbol | |
|---|
| ID | 8596886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1491811 |
|---|
| End bp | 1494231 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | virulence-associated E family protein |
|---|
| Protein accession | YP_003308206 |
|---|
| Protein GI | 269120029 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAACA ACAGGGATAT AGTGATCAGT ACTGGTAACA GCAGAAAGTC AATAGACTGG
AAAACGGAAG TAATGAAGTG GTCTGATTTT GTTAATAAAA TAAAAACACC GGTTCGTACT
GATGAAACTT TAGAAGACTT TCTGGCGATG AGAAAACCGG ATCAGGATGA ATTGAAAGAC
GTCGGAGGTT TTGTAGGCGG GAAGCTTAAA GAAGGTAAGA GAAGAAATGT AAATATATTA
TCAAGGGACC TTGTAACTCT TGATTTGGAT AATATAGAGT CCGGGAAAAC ACAGGAAGTA
TTAAAAAGAA TAAGTGGTCT TAATATCGGA TATGCCGTAT ATTCAACAAG AAAACATTCA
GATTATCAGC CAAGATTAAG AGTAATTATC CCTGTTGACC GCAGTATGAC TTCTGATGAA
TATGAACCGG TGGCAAGAAA ATTAGGAAAT ATGATAGGAA TAGGGCTGTG TGATCCTACC
ACTTTTGAAG TAGCAAGATT GATGTTCTGG CCGAGCTGTA GTTCTGACAG TATTTATATT
AACGAACATG AAGATAAGCC TTTTATAAAG GTTGACTGGG TATTATCTCA ATATAATGAC
TGGAAAGATG TTACAGAGTG GCCACAAGTT CCGGGTTATG ACAAGGTTAG GGAAAATCAG
GTAAAAAAGC AACAGGACCC TACTGAAAAA GGCGGAGTAA TAGGGGCTTT CTGTAAAGTA
TTTAATATAT ATGAGGCAAT AGAAAGATTT ATACCTGATA GTTATGAAAT ATGTGATGTA
AAAGACCGGT TAACTTATAC CGGTGGGTCA ACTTACGGCG GGGCAGTAGT CTATGATGAT
AAATTTGTAT ATTCTCATCA TGCAACGGAT CCGGCAGGGC AAACTTTATG TAACGCTTTT
GATTTAGTAA GACTCCATAA ATTTGGTGCT CTTGATGAAG AAGCAAAAGA ATTGACACCT
AATGGAAAAT TACCGTCCTC TGTTGAGATG CGTAAACTGG CACATGGAAT TGATGAGGTT
AACAATCTTA TGATGCAGGA GAAATATCAA AAAGCTGTAG ATAATTTTGA TGTAGTTGAA
AACAAAGAAA TGGATACATC ATGGATAAAA CAGCTGATAA GAGATAAGAA TGGCAAGATT
GAAAGTACAA TAAAAAATAT AGAAATAATA TTGGAAAATG ACCCCTACTT AAAAGGGAAA
ATTACTTTAG ATGAGTTTGC TAACAGAAGT CTGGTGTTAG GAAAACTTCC TTGGGATCAT
TCAGAAGTTT TTGAGCCCAG AGAGTGGGAA GATGCCGACG ACAGTGGTCT TAGAAGTTAT
TTAGAAACAG TACACGGCAT AGTAGGAATG AATAAAATTT ATGATGCCTT GATGCTTGTG
ACGAAAAAAT ATAAATCAAA TGAAGTAAAA GATTACCTTG AAAGTTTAGT ATGGGACGGG
GTGTCCCGTC TTGAAACCTT ACTAATAGAT TATTTCGGAG TAGCTGATAA TTCTTATACA
AGACAAGTTA TGAAAGTATC TTTAACAGCA GCTGTAGCAA GAGCGGTAGG AAAAGGAGTG
AAGTGGGATT ATACGCCGAT AATATACGGT CCTCAGGGGA AATATAAAAC ATGGTTTTTC
GAAATATTGG GTAGTAAGTG GTTTAATAAC AGCCTTGGAA ATTTTGACGG GAAAGAAGCA
GCTATAACAA TTCAGGGCTC TTGGATAGTA GAACTTGGAG AACTGGCGAG TATGGCTAAA
TCAGAGCTGA ATGCAATAAA ACTCTTTCTT ACCAAAAGAG AGGATATATA CAGAGAACCC
TTTGGGAGAA GAACGGGAAA ACACCCAAGA AGATGTGTAT TTTTTGGAAC AACTAATGAC
TGGGAATTTT TAAGGGATAG AACAGGAGAT CGAAGATTTT GGCCAGTTGT AATTTTAGAG
ACTGAGCCTA CAAAAGTAGT GCCTGTAGAT TTACCAAAAG AACTGGATCA GATATGGGCA
GAGGCATATT TTAACTATTC GGTAATGGGT CTTAAGCTCG ATTTAGAAGG AGACGAAGCT
AAAGCCATAG CTTTAGAAAT GCAGCAACAG CATAGTGAGA GCAGTCCATT AGAAGGTATG
ATAACAGAAT TTTTAGAAAA AGAAATACCA GAAGACTGGC AACGGAAAAC AGTAAAACAG
AGAAGAGATT ATTTTAATAG CGGTATGGAG CCAGTTAAAG ATAATACAAA AAAATATATA
AAACGAGATA GAATATGCGC CTTAGAGATA TGGAATGAAT GTTTTGGCAG AGATCCGGGA
AGTTTGAAAA GATTTAATAC AAAAGAGATA AACGATATAC TTGCCAATAA TCCAGCATGG
GAGAGAGGGA AAAAAGCAAT AAGATTTGGA GAGTATGGAG TGCAAAAAGG TTTTAAAAAG
AAAGATGATA TCAAGAAATA A
|
|---|
| Protein sequence | MENNRDIVIS TGNSRKSIDW KTEVMKWSDF VNKIKTPVRT DETLEDFLAM RKPDQDELKD
VGGFVGGKLK EGKRRNVNIL SRDLVTLDLD NIESGKTQEV LKRISGLNIG YAVYSTRKHS
DYQPRLRVII PVDRSMTSDE YEPVARKLGN MIGIGLCDPT TFEVARLMFW PSCSSDSIYI
NEHEDKPFIK VDWVLSQYND WKDVTEWPQV PGYDKVRENQ VKKQQDPTEK GGVIGAFCKV
FNIYEAIERF IPDSYEICDV KDRLTYTGGS TYGGAVVYDD KFVYSHHATD PAGQTLCNAF
DLVRLHKFGA LDEEAKELTP NGKLPSSVEM RKLAHGIDEV NNLMMQEKYQ KAVDNFDVVE
NKEMDTSWIK QLIRDKNGKI ESTIKNIEII LENDPYLKGK ITLDEFANRS LVLGKLPWDH
SEVFEPREWE DADDSGLRSY LETVHGIVGM NKIYDALMLV TKKYKSNEVK DYLESLVWDG
VSRLETLLID YFGVADNSYT RQVMKVSLTA AVARAVGKGV KWDYTPIIYG PQGKYKTWFF
EILGSKWFNN SLGNFDGKEA AITIQGSWIV ELGELASMAK SELNAIKLFL TKREDIYREP
FGRRTGKHPR RCVFFGTTND WEFLRDRTGD RRFWPVVILE TEPTKVVPVD LPKELDQIWA
EAYFNYSVMG LKLDLEGDEA KAIALEMQQQ HSESSPLEGM ITEFLEKEIP EDWQRKTVKQ
RRDYFNSGME PVKDNTKKYI KRDRICALEI WNECFGRDPG SLKRFNTKEI NDILANNPAW
ERGKKAIRFG EYGVQKGFKK KDDIKK
|
|---|
| |