Gene Sterm_1364 details

Gene Information

• Locus tag: Sterm_1364
• ID: 8596840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1447771
• End bp: 1448565
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 32%
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_003308160
• Protein GI: 269119983

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000696413
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT TTTTTTTATT TTTTTTTATC AGTATTTTTA TGTTCACAGC TCAGAGTAAT 
CAGCGGGATC TGATTACACA GGAGATGAAA AATTTCGGCA TAAAGCAGAA ATCAATTGAT 
TTATACTGGA AAACCAAAGA ATTTACAGTT CCTGACAAGG AATATGAGAA AACGCTGAAT 
AAAGCTATAG AAGCTGATCC GAGAAATTAT TTTGCGCTGG ATGATATGGG AGTTCATTAC 
AGACGTTCGA ATAATCCGGA TAAAGCAATA GAGTATTATA AAAAATCTAT TGCGGTAAAT 
CCGAATAATC CGTTTCCATA TTTTAATGCC GGTGTAGCAT ATATGTATAA AAAAGATTTT 
GTAAATGCTG AAAGGATATA CAAGCAGCTG ATTACGGCTA TTCCTGACTA TCCTGAAGGA 
TACTACGGAC TGGGGCAGGT TTATCTGAAT ATGGAAAATT ATGCAAAAGC TCTGGAATTT 
ATACAAAAGG CAAAGGAAAA ATACAAGAAT CTGGATACTA AAAAATATTT TGAGGAAGCT 
GCAAAAAAAG ATATGTATAT TGCAGACTGT AATTATTTGG AGGGACAGAT AAATTACAGA 
ATGAAAGATT ATCAAAAGGC TGTTGACGGT TTTTTTGATT CATTTGAGGA TATGAAAGCT 
ATAAGATATT ATGCTCTTTC TGATTTTGCC ACGCTTGCAT ATTTTGCAAA TGAAGGATTA 
AAAGGAACAA ACCCGAAACA ATATGATAAA AATCTTAAAA AATTTGAAGC TGCGGGTATA 
AAAATGAAGC GGTAA 

 

Protein sequence

MKKFFLFFFI SIFMFTAQSN QRDLITQEMK NFGIKQKSID LYWKTKEFTV PDKEYEKTLN 
KAIEADPRNY FALDDMGVHY RRSNNPDKAI EYYKKSIAVN PNNPFPYFNA GVAYMYKKDF 
VNAERIYKQL ITAIPDYPEG YYGLGQVYLN MENYAKALEF IQKAKEKYKN LDTKKYFEEA 
AKKDMYIADC NYLEGQINYR MKDYQKAVDG FFDSFEDMKA IRYYALSDFA TLAYFANEGL 
KGTNPKQYDK NLKKFEAAGI KMKR