Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1355 |
Symbol | |
ID | 8596831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 1439826 |
End bp | 1440737 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003308151 |
Protein GI | 269119974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000118066 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAATA TATGTAGTGT AAAATTTAGA GATGGAAGCA AAGAGGAATT ATTACCCGGT CTTACTCCGG ATTTTCCTTA TATTGCTTCT TTTGTCGAAT TAGACAAGCA TGCAGGCCGT TTTGTTCCCT GGCACTGGCA TAAAGAAGTT GAATTATTTT ATATAAGAAG CGGGGTTCTG GAATATTATA CACCAGAGAA AAAAATTGTG TTTCCGGCAG GATCAGGCGG GATCATCAAT TCTAATGTAC TGCACATGAC CAAAACACAA GAAAAGGTAA ATAATACAGT TCAGCTGCTG CATATATTCG ATACTTCCTT TATAGGGGGA CAATCAGGGA GTAAAATAGA GCAAAAATTT ATCATCCCCT TTATTACAGC CCCGCAAATA GAAGCATTGG CATTCTATCC CGATAATCCT GAACACTCTG ATGTATTAAG TATGATTCGC GAGTCCTTTA ATATAAAAAA TGACAGCTAT GCTTATGAAT TGAGATTACG TTCAGCTTTA TCAGAAATAT GGAGCCGGCT TTTTTTATTC TCAGAACCGC TGTTAAAAGA AAAAGGAACT TATGATAAAA CAAATGACGA ATTAAAAATG ATGATGATAT ACATCTATGA ACATTATATG GAAAAAATTT CTGTATCTGA AATTGCAAAC TATGCATTTA TCAGCGAACG AAAGTGTTTT CGAATATTTC ACGAACGTCT GCATACTACA CCGACAGAAT TTATAAAAAA TTACCGTCTT CAAATGGCAT GCAATATGTT AATAGGAAGC AGAGAGGCAA TTTCATCTGT CGGTCATGCC TGCGGACTGG GAAGCAACAG TTATTTCGGA AAAGTTTTCC GTGAGCATTT TGGATATTCC CCGGCAGAAT ACCGGCAAAA ATGGCAGAAT AATGATATAT AA
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Protein sequence | MKNICSVKFR DGSKEELLPG LTPDFPYIAS FVELDKHAGR FVPWHWHKEV ELFYIRSGVL EYYTPEKKIV FPAGSGGIIN SNVLHMTKTQ EKVNNTVQLL HIFDTSFIGG QSGSKIEQKF IIPFITAPQI EALAFYPDNP EHSDVLSMIR ESFNIKNDSY AYELRLRSAL SEIWSRLFLF SEPLLKEKGT YDKTNDELKM MMIYIYEHYM EKISVSEIAN YAFISERKCF RIFHERLHTT PTEFIKNYRL QMACNMLIGS REAISSVGHA CGLGSNSYFG KVFREHFGYS PAEYRQKWQN NDI
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