Gene Sterm_1226 details

Gene Information

• Locus tag: Sterm_1226
• ID: 8596705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1334263
• End bp: 1336236
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 37%
• Product: excinuclease ABC, B subunit
• Protein accession: YP_003308025
• Protein GI: 269119848

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.56679
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTA AGATACATTC GGACTTTAAG CCTACCGGAG ATCAGCCGGA AGCAATAGAA 
AAAATAGTGG AAAATCTGGA AAACGGAGTT TCCGATCAGA TACTTCTCGG GGTTACAGGT 
TCCGGGAAGA CTTTTACAGT GGCAAATGTA ATAGAAAGAT TAAACAGACC TGCATTAATC 
ATGGCTCCGA ACAAAACACT CGCAGCACAG CTTTATAACG AATATAAGCA GTTTTTTCCA 
GATAATGCCG TGGAATATTT CGTATCATAT TATGATTATT ATCAACCGGA AGCTTATGTA 
GCTGTTACGG ATACCTACAT AGAGAAGGAT TCGTCAATAA ATGACGAAAT AGATAAATTG 
CGGCATGCTG CTACGGCAGC CCTTTTGAAC AGAAGAGACG TTATTATAGT AGCATCTGTT 
TCTGCAATAT ACGGCTTAGG ATCACCGGAA GCATATAAAA AAAGATCTAT ACCGATAGAT 
GTTTCTGTGG GATTTGACAG AAATGATCTG ATACTGAGAC TTGTAGATCT GAGATACGAA 
AGAAATGATT ATGCATTCGA ACGTGGAAAG TTCAGAGTTA ACGGGGATGT TGTGGATTTA 
TATCCGACTT ATCAGGATAC TGGATATAGA TTTGAGTTTT TCGGGGATGA TCTGGAAGAT 
ATATCGGAGA TAAATACATT AACAGGACAG AAAATCAGGA AAATTCAGAG AATTTCAATA 
ATGCCGGCGA CTCATTACCT TTCTACAGAG GATTCCGAGA CAATGTTCAG GGAAATAAAA 
AGTGAACTGG ATGAGAGAAT AGAATTTTTT AATAAAAAAA ATATGCTTCT GGAAGCACAG 
AGAATAAAAC AAAGAACCGA ATATGATCTG GAAATGATAG CAGAAATAGG TTTTTGCAAG 
GGGATAGAGA ACTATTCCAG ATATCTGACA GGAAAAGGTC CGGGAGAAAC ACCCGACACT 
CTGATAGATT ATTTCCCAAA AGATCTTGTT GTCTTTTTGG ATGAGTCACA TATTTCCGTT 
CCGCAGATTA ACGGTATGTA TAAAGGGGAC AGGGCAAGAA AGCAGTCATT GATTGATAAC 
GGGTTCAGAC TTCCAAGTGC TTTTGATAAC AGACCGATGA GATTCGAGGA ATTTTTCGAA 
AAAACACCTC AGGTTGTTTA TATTTCAGCT ACTCCGGGAG ATTATGAAAT GGAGCAGTCA 
AAGAGTGAGG TAATAGAACA GCTGGTAAGA CCTACGGGAA TAGTGGAGCC TACTATAGAA 
GTAAGACCTA CAAAAAATCA GATCGATGAT TTAATGGATG AAATAAAGCT GAGAGTAGAA 
AAGGGCGAAA GGGTGCTTGT TACCACACTT ACTAAAAAGA TGGCTGAAGA GCTTACGGAT 
TATTATCTGG AATATGGTCT GAAAGTAAAA TATATGCATT CTGATATAGA AACACTGGAA 
AGAATAGAGA TAATAAGAGG ACTACGGAGA GGGGAATTTG ATGTACTTGT GGGGATAAAC 
CTTTTGAGAG AGGGATTGGA TATACCGGAA GTAGCACTTG TAGCTATTTT GGAAGCTGAC 
AAGGAAGGAT ATCTGAGATC CAGAAGATCA TTGATACAGA CTATGGGAAG AGCGGCAAGA 
AACGTAGAAG GAAAAGTAAT TCTTTATGCA GACAGAATAA CAGGATCAAT GAAAGAAGCA 
ATGGACGAGG TAGAGAGAAG ACGTGAAATT CAGATCGAAT ATAATAAAGA ACATAATATA 
AATCCAAAAA CAATTGTAAG TAAAATTTCT GATTCCATTG TGGATTATGA AATAGGCAAT 
GAAGAAAAAG TAGACAGAAT CAAGAAGATT TACAAGGATA AAAAAGATAT AGAAAAAGAG 
ATAAGAATTC TTGAAAAGGA AATAAGAAAA CTGGCTGAGG AGCTGAATTT TGAAAAGGCA 
ATAGCTAAAA GAGACGAGAT GAAGGCTCTG AAAGAGCTGC TGCTGGAATT ATAA 

 

Protein sequence

MDFKIHSDFK PTGDQPEAIE KIVENLENGV SDQILLGVTG SGKTFTVANV IERLNRPALI 
MAPNKTLAAQ LYNEYKQFFP DNAVEYFVSY YDYYQPEAYV AVTDTYIEKD SSINDEIDKL 
RHAATAALLN RRDVIIVASV SAIYGLGSPE AYKKRSIPID VSVGFDRNDL ILRLVDLRYE 
RNDYAFERGK FRVNGDVVDL YPTYQDTGYR FEFFGDDLED ISEINTLTGQ KIRKIQRISI 
MPATHYLSTE DSETMFREIK SELDERIEFF NKKNMLLEAQ RIKQRTEYDL EMIAEIGFCK 
GIENYSRYLT GKGPGETPDT LIDYFPKDLV VFLDESHISV PQINGMYKGD RARKQSLIDN 
GFRLPSAFDN RPMRFEEFFE KTPQVVYISA TPGDYEMEQS KSEVIEQLVR PTGIVEPTIE 
VRPTKNQIDD LMDEIKLRVE KGERVLVTTL TKKMAEELTD YYLEYGLKVK YMHSDIETLE 
RIEIIRGLRR GEFDVLVGIN LLREGLDIPE VALVAILEAD KEGYLRSRRS LIQTMGRAAR 
NVEGKVILYA DRITGSMKEA MDEVERRREI QIEYNKEHNI NPKTIVSKIS DSIVDYEIGN 
EEKVDRIKKI YKDKKDIEKE IRILEKEIRK LAEELNFEKA IAKRDEMKAL KELLLEL