| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0950 |
|---|
| Symbol | |
|---|
| ID | 8596429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 995477 |
|---|
| End bp | 996220 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | phosphotransferase system PTS sorbose-specific IIC subunit |
|---|
| Protein accession | YP_003307749 |
|---|
| Protein GI | 269119572 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.333024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACAAG CTTTATTAAT GGCTTTTTTA GCCCTGTTAA ACGGAATGCA GTGGCCGGTA
TCCTGGTGGC TTTTCAGAGA ACCGGTTATG GCAGGTTTCT GGGTAGGGTT AATTTATGGA
AATCCTGTAC AGGGAGTAAT GATAGGTGCT ACTATTAATG CTTCATATCT GGGCTGGATA
AGTGCCGGAG GCGCTAATGC CTCTGATTTA TACTGGGCAG GATTACTCGG GGCATTCGTT
GCCATCAAGG GAGGTATGAA TATAGAGCAG TCAGTAGCAT TTGCGGTGCC TATAGGATTA
CTGGGCAATT ATGTACACGT CACATATATG ACTCTTGCAT CATTCTGGCC TACAAAAATG
GATAAACTAG CTGAAAACGG CAACTGGCGC GCTATAAGAA AAATTCAGTT TTTCGGAGGC
CCTGCAATTG TACTTGTGCT AAGAGCACTG CCGGTATTCC TGATAGCTTT ATTAGGTAGC
GAATATATAC AGATCATGAT TAATCTGCTG CCGCTTTGGG CAATGAGAGG ATTAAGTGCT
GTAGGAAAAA TTCTTCCTGC ATTAGGTATG TCGATGCTGT TTAAATTTAT GTATAAGAAA
GAACTGCTTC CTTTCTTTGC TATTGGATTT GCAATTGCCG CATATACAGG AATGAAGGAC
TTAATGATGT ATGCAATTAT TTCTGTTTGT ATAGCATTTG TTTTAATCAA ACTTGGATTC
ACTGATGTAA AGGAGGAGTC ATAA
|
|---|
| Protein sequence | MVQALLMAFL ALLNGMQWPV SWWLFREPVM AGFWVGLIYG NPVQGVMIGA TINASYLGWI
SAGGANASDL YWAGLLGAFV AIKGGMNIEQ SVAFAVPIGL LGNYVHVTYM TLASFWPTKM
DKLAENGNWR AIRKIQFFGG PAIVLVLRAL PVFLIALLGS EYIQIMINLL PLWAMRGLSA
VGKILPALGM SMLFKFMYKK ELLPFFAIGF AIAAYTGMKD LMMYAIISVC IAFVLIKLGF
TDVKEES
|
|---|
| |