Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0608 |
Symbol | |
ID | 8596092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 660901 |
End bp | 662805 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | threonyl-tRNA synthetase |
Protein accession | YP_003307412 |
Protein GI | 269119235 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.769524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGAAA TAATATTACC GGATAGCAGT ATAAGAACTC TTGAGAATCC GGTTTCAGTT TTGGAATTTG CAAAAAGTAT AGGTTCGAGC CTCGGGAAGG CAACAGTGGG AGCACTTGTA GATAATGTGC AGGTAGATGC TTCATATATA TTAGATAAAT CTGCAAAGGT AGAGTTAATA ACTATAGATT CCGAAAAAGG AACAGAAATA TTAAGACACA GTGCTGCACA TATAATGGCA CAGGCAGTAC AGAGACTGTT CCCCGGAACA AAGGTGACAA TAGGACCGGT TATAGAAAAC GGATTTTTTT ATGACTTTGA TCCTGAGAAT CCTTTTACAG AAGATGATCT GGCAAAAATA GAAAATGAAA TGAAAAAGAT AATAAAAGAA AACTATAAAT TTGAAAGAAC AGAAATGAGT GCGGCAGACG CCAAAAAGAT GTTTCTTGAT ATGAAAGAGG ACTACAAGAT AGAAATCATA GATGATCTTG GTGAAGAAAA AGTAAGTATT TACACAATAG GAGAGTTTAA AGATCTGTGC CGCGGAACTC ACCTTCCGTC AACAGGATAT CTTAAGGCTT TTAAGCTGAT GTCTACTGCA GGGGCTTACT GGCGTGGTGA TTCTAATAAG AAGATGCTTC AGAGAATATA CGGAGTGGCA TTTTCTGCCA AAAAAGAGCT TGACGATTAT CTGATAATGA TGGAAGAAGC TGAGAAGAGA GATCACAGAA AATTAGGAAA GCAGCTTAAC CTCTTTTTCC TTGATGAGCA CGGACCCGGA TTTCCGTTTT TCATGCCAAA AGGAATGGAA GTAATAAATA AATTACAGGA AATCTGGAGA AGAGAACATA AAAAAGCAGG ATACAAGGAG ATAAAAACTC CTGTTATGCT TGATAAAGAA TTATGGGAAA TTTCAGGACA CTGGTTTAAC TACAGAGAAA ATATGTATAC TTCGGAAATA GATGAAAAAG AATATGCAAT AAAACCTATG AATTGTCCCG GAGCAATACT GGCATACAAA AATAACCTTC ACTCATATAA GAATTTTCCG TTGAAATACG GAGAGATGGG ACTTGTTCAC AGACATGAAT TCAGCGGAGC ACTTCACGGA CTTATGAGAG TAAGAGCATT TACACAGGAT GATGCTCATG TATTCTGTAC AGAGGATCAG ATAGAGGATC AGATAATGGA GATTATAAAT CTCTATGACA GATTCTATAA ATTATTTGGT TTTGAGTATA ACATAGAGTT ATCGACTAAG CCGGATAAGG CAATAGGTTC TGATGAAATA TGGGATATTG CGGAAAGAGA TCTTACAAAT GCACTTGTAA AAATGGGAAT AGATTATAAG CTGAATCCCG GGGACGGAGC ATTTTACGGA CCGAAAATAG ATTTCAAAAT GAAAGATTCA ATAGGAAGAA TATGGCAGTG CGGAACTATA CAGCTTGACT TTAACCTTCC TCTGAGATTT CATATGAGTT ACATCGGACC TGACGGGGAA AAGCATCAGC CTGTAATGAT TCACAGAGCA ATGTACGGAA GTATAGAAAG ATTTATGGGA ATACTTATAG AGCACTATGC AGGGGCGTTT CCGATATGGC TTGCACCTGT ACAGGTAAGC ATACTGACTA TTTCCGGAGA GCAGGCAGAA TATGCATCTG ATCTGTTCAA AAAATTACAG AATATCGGAA TAAGAACAGA ACTTGATATA AGAGATGAAA AAATAGGTTA TAAAATAAGA GAAGCCAATG CAGAACAAAA AATACCGATT CAGCTGATCA TAGGAAAGAA TGAAGTGGCT AATAATGAAG TTAATATAAG AAGATTCGGT TCACAGGAAA GCAATACAAT GAAGGCAGAG GATTTTCTAA AATTAATAGA AGAAGAATCA AAAATAGTAT TTTAA
|
Protein sequence | MIEIILPDSS IRTLENPVSV LEFAKSIGSS LGKATVGALV DNVQVDASYI LDKSAKVELI TIDSEKGTEI LRHSAAHIMA QAVQRLFPGT KVTIGPVIEN GFFYDFDPEN PFTEDDLAKI ENEMKKIIKE NYKFERTEMS AADAKKMFLD MKEDYKIEII DDLGEEKVSI YTIGEFKDLC RGTHLPSTGY LKAFKLMSTA GAYWRGDSNK KMLQRIYGVA FSAKKELDDY LIMMEEAEKR DHRKLGKQLN LFFLDEHGPG FPFFMPKGME VINKLQEIWR REHKKAGYKE IKTPVMLDKE LWEISGHWFN YRENMYTSEI DEKEYAIKPM NCPGAILAYK NNLHSYKNFP LKYGEMGLVH RHEFSGALHG LMRVRAFTQD DAHVFCTEDQ IEDQIMEIIN LYDRFYKLFG FEYNIELSTK PDKAIGSDEI WDIAERDLTN ALVKMGIDYK LNPGDGAFYG PKIDFKMKDS IGRIWQCGTI QLDFNLPLRF HMSYIGPDGE KHQPVMIHRA MYGSIERFMG ILIEHYAGAF PIWLAPVQVS ILTISGEQAE YASDLFKKLQ NIGIRTELDI RDEKIGYKIR EANAEQKIPI QLIIGKNEVA NNEVNIRRFG SQESNTMKAE DFLKLIEEES KIVF
|
| |