| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0588 |
|---|
| Symbol | |
|---|
| ID | 8596072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 641434 |
|---|
| End bp | 642681 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | Coproporphyrinogen dehydrogenase |
|---|
| Protein accession | YP_003307392 |
|---|
| Protein GI | 269119215 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA AGCGTTTTAA GTCACATCAT GATGTAAAAT CAATCATTGG TGCAAAATTT
AAATCATCTA AAAGAATGGG AACACCAGAA GAGATAAAAG TTCTTTTTGA TTCGGAACCG
AAAGATGAAA CAGGAATTTT ATATATTCAT ACTCCTTTCT GTGATAAGAT CTGTTCATTC
TGTAATTTGA ACAGAAAGCA GCTGGACAAT GACCTTGAGG AGTATACAGA TTTTTTAATA
AGCGAGTTTG AAAAATACGG GGCTACTAAT TATATGAGAC ACAAAAGGCT GGAAGTAGTT
TACTTTGGCG GCGGGACACC TACTATTTTT AAAGCCGGAC AGCTTGAGAG AATATTGGAG
TCTATAAATA AAAATTTTAT CCTGAAAGAT AACTGTGAAT TTACTTTTGA AACAACACTT
CATAATCTTA CGGATGAGAA GCTGGAAGTA ATGGAAAGAC TAGGGGTAAA CAGATTAAGT
ATAGGAATAC AGACTTTTTC CGATAGGGGA AGAAAAATAT TAAACAGAAC TTATGATAAA
GAAACAGCAG TGAAAAGGCT GGGAGAAATA AAAGCAAAGT TTAAGGGACT TGTCTGTGTG
GATATTATTT ATAATTATCC TGACCAGACT CCTGAGGAAG TGAAGGAAGA TGCAGAGATA
GTGCATAGTC TGAATATAGA CAGTTCGAGT TTTTATTCAC TGATGATACA TGAAGGTTCG
AAAATGTCAA AAGATATTAA GGATGATGTT TTTCATCTGG ATTATAAACT TGAAACTGAT
AAGGAACTGC ATAATACATT CATGAATACA CTTTTGGATA CAGGAGAGTA TGAAATACTT
GAAATAACTA AAATAAATAA AAAGGGCAGA GATAAGTATA AATATATTAC ACTGTCAAAC
AAGGGAACAG ATATTTTGCC GGTGGGACTC GGAGCAGGAG GAAAACTGGG GAATTATGAG
ATGTTCAGAA TGAATTATGA AAGGCAGTTC TTTTCATACA GCAGTGACGA AGAACAGAGG
ATAAAAAATT TAAGCGGATT ATTCCAGTAT CCGGAAGTGT ACTTTGAAGA CATAAAGAAA
TTTGTGCCGG ATAATACTTT TAATAAAATC TATAAATTGC TTGAGGGGAT GAAAGAAAAG
GAATTAATGG ATATAAACAA GGATCATATA GAATTAAAAG GCGATGGTTT GTTTTGGGGA
AATACAATAG GGCGTGAAGT AATTTCAATT AGTTTAGAGG AGGAATAA
|
|---|
| Protein sequence | MFEKRFKSHH DVKSIIGAKF KSSKRMGTPE EIKVLFDSEP KDETGILYIH TPFCDKICSF
CNLNRKQLDN DLEEYTDFLI SEFEKYGATN YMRHKRLEVV YFGGGTPTIF KAGQLERILE
SINKNFILKD NCEFTFETTL HNLTDEKLEV MERLGVNRLS IGIQTFSDRG RKILNRTYDK
ETAVKRLGEI KAKFKGLVCV DIIYNYPDQT PEEVKEDAEI VHSLNIDSSS FYSLMIHEGS
KMSKDIKDDV FHLDYKLETD KELHNTFMNT LLDTGEYEIL EITKINKKGR DKYKYITLSN
KGTDILPVGL GAGGKLGNYE MFRMNYERQF FSYSSDEEQR IKNLSGLFQY PEVYFEDIKK
FVPDNTFNKI YKLLEGMKEK ELMDINKDHI ELKGDGLFWG NTIGREVISI SLEEE
|
|---|
| |