Gene Sterm_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0550 
Symbol 
ID8596034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp598257 
End bp599099 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content39% 
IMG OID 
ProductCof-like hydrolase 
Protein accessionYP_003307354 
Protein GI269119177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATAA AAGCTATTGT TATGGATGTT GACGGGACAT TAACAAATGA CAAAAAGGAA 
ATCACGCCGA AAACGAGAGA AGTTTTGCTG AAAGCACAAG AACAAGGAAT TCTACTGATT
TTAGCTTCGG GCAGACCGAC AACAGGCTTG GTTGAAATGG GGAAAGTGCT TGAGATGGAT
AAAAACAACG GACTGTTTAT TTCATATAAC GGTTCAAAGG TAATAAATTT TCAGACAGGG
GAGGAATTAT TTAATGAGCC TCTGAAGCTG GAAGACGCTA AAGCAGTATT GGAGCATATG
AAAAAATTCG AGATAAAACC AATGATTGAT AAGGGCGATT ATATGTATGT AAACGATGTT
TATAACTGTA TGATTAGATT CAGAGGGGAA CCCTTTAATG TTATAAAATA TGAATCAAGA
GGCGGCAATT ATAAATTATG CGAGATTGAT GATCTGGCAG CATTTGTGGA TTACCCGCTG
AATAAGATAC TTACTGCCGG CGAGCCTGAG TATCTGCAGG AGCACTATAT TGAAATGATG
GAGCCGTTTA AAGATAAGCT GAATTGTATG TTTACAGGAC CATTTTATTT TGAATTTACT
GCGAAGGATA TAGATAAGGC AAAAGCACTG GATACTGTGC TGAAGCCGCT GGATATAACA
GCTGACGAAG TGATTGCATT TGGTGACGGG CATAATGACA TCTCTATTAT AAAGTATGCC
GGAACAGGTG TAGCTATGGA AAATGCCGTA GCTGACCTGA AAGAGGCGGC AGATGAGATT
ACTTTGTCAA ATGAACAGGA CGGAATTGCG GAGTCTTTAT TAAAGCATAT TTCCAATCTT
TGA
 
Protein sequence
MGIKAIVMDV DGTLTNDKKE ITPKTREVLL KAQEQGILLI LASGRPTTGL VEMGKVLEMD 
KNNGLFISYN GSKVINFQTG EELFNEPLKL EDAKAVLEHM KKFEIKPMID KGDYMYVNDV
YNCMIRFRGE PFNVIKYESR GGNYKLCEID DLAAFVDYPL NKILTAGEPE YLQEHYIEMM
EPFKDKLNCM FTGPFYFEFT AKDIDKAKAL DTVLKPLDIT ADEVIAFGDG HNDISIIKYA
GTGVAMENAV ADLKEAADEI TLSNEQDGIA ESLLKHISNL