Gene Sterm_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0545 
Symbol 
ID8596030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp592966 
End bp594219 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content38% 
IMG OID 
ProductChloride channel core 
Protein accessionYP_003307350 
Protein GI269119173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0459516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AACTTGATTT AGTCATATAT CTGATAAAAT GGTTTACATT CTCTTTAATT 
ATAGGGATAC TTTCAGGAAG TGCATCGGCA GTTTTTCTGT TAATGCTTGA ATGGGCAACT
AAAACCAGAG AATATAATCC TTTTCTAATT TATTTTTTAC CGGCCGGAGG CTTTATCGTC
AGCTTAATTT ATTACTTTTA CGGCAAGGAA GTAAGTAAAG GAAATAATTT AATATTAGAT
GAAATAAACA GCCCCAAAAA AGTAATAAAG CTTCGAATGG CTCCCATGAT CTTATTCGGA
ACTGTTATCA CACATCTTTT CGGCGGTTCG GCTGGAAGAG AAGGAAGCGG AATACAAATA
GGCTCTTCCA TCGCTGACCA GTTAAGCCTT ATTTTCAAAT TTAACAAATC AGACAGAAGA
ATAATCCTCA TTTCCGGAAT GGCGGCAGGA TTCGGCTCTG TTTTTGGGAC ACCCTTGGCA
GGGGCGGTAT TCGGTCTTGA GGCTGCTGTC TTGGGACGTT TAAAATATGA AGCCCTGATA
CCTGCTTTTC TCTCGGCAGT AATAGCCGAC GTGGTTTCAA AAAACTGGTG GGGCATAGTA
CACCCGATAT ATAAAATAAA TTTTTTCCCT GAAATAAATA TAAAAAATAT AATTTTTGCC
TGTCTGGCAG GAGTTATTTT CGGCTTAACA GGAAAAATCT TTTCACTCGG GCTGAATTTT
ATAAAATCCC TTTTTTCAAA ATATATAAAA TTTTCACCTT ACAGTGCAGT TATCGGCGGA
ATCATTATAG TATTTCTTAC AAAATTATTA GGAACCTATG ATTATAACGG TCTTGGACTG
GAAATAATAT CCAAAAGCTT CACCAGCCAG ATATTTGCTG AAGTTTTCAT TTTCAAAATA
CTATTTACGC TTATAACTCT GGGATCCGGT TATAAAGGCG GGGAGGTAAC CTGCTTATTC
TTCATAGGCT CTGCATTAGG CAATACACTG TCGCGGATAA TAAGACTTCC TATGGATTTG
ATGGCAGGAA TGGGACTGGT TTCTGTTTTT TCAGCTGCTG CAAATACTCC TCTTGCGTGT
ATTGTAATGG CGATGGAGCT GTTTGGCGAT AAAATAGGAA TTTATGCAGC AGTATCATGT
GTTGTCGCAT ACTTATTTTC AGGACATACA GGTATATATG ATTCGCAGAA AGTAGGCTGG
TATAAGCACT TTAAGCTGGT AAGCGACAGA GGAAAAAAAC TGGAGGATTT ATAA
 
Protein sequence
MKKELDLVIY LIKWFTFSLI IGILSGSASA VFLLMLEWAT KTREYNPFLI YFLPAGGFIV 
SLIYYFYGKE VSKGNNLILD EINSPKKVIK LRMAPMILFG TVITHLFGGS AGREGSGIQI
GSSIADQLSL IFKFNKSDRR IILISGMAAG FGSVFGTPLA GAVFGLEAAV LGRLKYEALI
PAFLSAVIAD VVSKNWWGIV HPIYKINFFP EINIKNIIFA CLAGVIFGLT GKIFSLGLNF
IKSLFSKYIK FSPYSAVIGG IIIVFLTKLL GTYDYNGLGL EIISKSFTSQ IFAEVFIFKI
LFTLITLGSG YKGGEVTCLF FIGSALGNTL SRIIRLPMDL MAGMGLVSVF SAAANTPLAC
IVMAMELFGD KIGIYAAVSC VVAYLFSGHT GIYDSQKVGW YKHFKLVSDR GKKLEDL