Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0235 |
Symbol | |
ID | 8595731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 256832 |
End bp | 258565 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003307051 |
Protein GI | 269118874 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTCGCA AATTTTTAGA CTACATACTC AAATACAGAA AGAATATGAG CCTTGTTTTA TTGGTAGTTA TGGGAATCAC AGCTATTGAT CTTATACTTC CCTTTTTTTC AAGGCAGATT TTAAATGTTT ATATACCTGA AAATAATTCA GAAGCAATTA TAAAAGGCGG TCTGATATTC ACAGGACTGG TAATTATCTA TACCGGGCTT AATTTTTCAC AGGCTTACTT TGGTCATATC TGGGGCTTAA GACTGCATCA GGATATGAGA GAAAGAGCCT TTAAAAAATT ACAGGTTCTC CCATTTGAAT ATTTTGACAA GAACAAAGTC GGAATTATTT TATCCCGTGT TACTAATGAT CTTTTTACCA TATCAGAGAT GATTCACCAC GGATTAGAAG ACTTTCTTAC ATTTTTTCTT GTTTCAATAG TAGGTTTTAT ACTTTTATTG CAGATTAATA TCCCTATTAC TCTTCTTATA TTTGCTTTTG TTGCAGTTCA GCTGATTGCA ACTGCCATGG CAAGAAAGCA TATGGAGAAT ATTTTCAGAA AAGCAAGGGA AAAAACAAGC TCTGTTTATG CAAAGCTGGA AAGCAGCATA TCAGCAGTCC GTCTCACAAG AGCTTTTGCC AATGAAGGCC GTGAATTGGA GGACTTTAGA AGCGGGGCAA AGCTGCAGGA AAAAATGGCT AAAAGAACTA ATTTTGCACT TGCAATGTTT TCTGCAGTAA ATAACTTTTT CTCGTTACTT TTGAATATAG TTATACTTAC TATTTCAGGA ACCGCAGTAA TAAAAGGGGT TATCAATTAC GGAGATCTTT TGGCATATAT TGTTTACTTT AACCTGCTTA TGGCTCCGAT GAAGTTAATT ATCAGATCAT TTGAGACAAT TCAGGAAGGA TGGGTAAGTT TTGTCAGATT TCAGGAACTT ATAGACGAAC CAGAGCCTAT AAAAAATGCC CCTGATGCTG TTATGCTAAA AAATATAAAA GGTAATATAA ACTTTGAAAA TGTTACTTTC AAATATGAAG CAGGTACGGA AACTATACTG AAACACTTTA ATCTTAATAT TCCCGCCGGT AAAATGGTGG CTCTTGTAGG TCCGAGCGGT GTGGGAAAAA CTACAATTGC ACAGATAATT CCCCGTTTTT ATGAAATAGA ATCCGGGAAT GTTTATATCG ATGACACTGA TATAAGACAG GCTGACCTGC ACTCACTCCG TGAAAATATA GGATATGTTC AGCAGGATGT AGTAATTTTC TGGGGAACAA TAAGAGATAA TATAGAATAT GGAAAACTGG GAGCTTCCGA TATAGAAGTT ATTACTGCTG CAAAGCATGC AGGAATACAT GAATTCATAA TGTCACTTCC GGAAGGATAT GATACCTTTG TAGGAGAACG CGGTGTTAAA CTGTCAGGCG GTCAGAAACA AAGGATATCA CTTGCAAGAA TCTTTCTGAA AAACCCTAGG ATTCTTATTT TGGATGAGGC CACAAGTGCT CTTGACAACA TCACTGAAGC CATCATTCAG GAAAATATTG AAAAACTTAC AAAAAATAGA ACTGTTATAG TCGTGGCTCA CAGACTTTCC ACTATAAAAC AGGCTGATCA GATAATCGTA CTTGACAAAG ACGGCATTGT GGAATCTGGA ACCCATAGTG AACTCATCCG GAATGAAAAC GGACACTACT TCAAATTATA CAACACTCAG CTTAACGGCT TTATTACCGG ATAA
|
Protein sequence | MFRKFLDYIL KYRKNMSLVL LVVMGITAID LILPFFSRQI LNVYIPENNS EAIIKGGLIF TGLVIIYTGL NFSQAYFGHI WGLRLHQDMR ERAFKKLQVL PFEYFDKNKV GIILSRVTND LFTISEMIHH GLEDFLTFFL VSIVGFILLL QINIPITLLI FAFVAVQLIA TAMARKHMEN IFRKAREKTS SVYAKLESSI SAVRLTRAFA NEGRELEDFR SGAKLQEKMA KRTNFALAMF SAVNNFFSLL LNIVILTISG TAVIKGVINY GDLLAYIVYF NLLMAPMKLI IRSFETIQEG WVSFVRFQEL IDEPEPIKNA PDAVMLKNIK GNINFENVTF KYEAGTETIL KHFNLNIPAG KMVALVGPSG VGKTTIAQII PRFYEIESGN VYIDDTDIRQ ADLHSLRENI GYVQQDVVIF WGTIRDNIEY GKLGASDIEV ITAAKHAGIH EFIMSLPEGY DTFVGERGVK LSGGQKQRIS LARIFLKNPR ILILDEATSA LDNITEAIIQ ENIEKLTKNR TVIVVAHRLS TIKQADQIIV LDKDGIVESG THSELIRNEN GHYFKLYNTQ LNGFITG
|
| |