| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0158 |
|---|
| Symbol | |
|---|
| ID | 8595654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 172341 |
|---|
| End bp | 173678 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
|---|
| Protein accession | YP_003306974 |
|---|
| Protein GI | 269118797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.394202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATG CAATAGTATT CGGAGCGGGA CTAAGCGGGC ACGGGGCTAA GGAATTACTT
GAAAAAAAGG GATATAATGT TTTTCTTATA GATGATAAAA CCGGTATAAA AAGCGAAGAA
GGAATTAAGA TAATTGACGA GCAGAAGATA GAATTTATTG TAAAAAGTCC GGGAATACCA
TGGGACGCGG AGCTTCTGGA AAAGGCAGAC AGCTTAAGGA TAAGCGTGAT ATCAGAGATA
GATCTGGCAT ACAGGTATAT GGATAAAAAA ACTAAAATAA TTTCGATTAC AGGAACAAAC
GGAAAAACAA CTACTGCTAC AAAAATATAC GAGCTTTTGA AGGAAGCCGG ATTTGATGCT
GAACTTGCGG GGAATGCAGG ATTTTCTTTT GCAAAACTGG TTAGTGACGG AAAAGAGCCT
GATTATGTTG TTCTGGAATT AAGCAGCTAC CAGCTCGAAA ATGATCCCGA AGTACATTCG
CACATAGCAG GAATAATAAA TTTGACGCCG GATCATTTGA CAAGGTATAA TTCACTTGAC
GATTATTATA AAACAAAATT TAATATATTC GATCATCAGA ATGAAAATGA CTATGCATTG
ATAAATCTTG ACGATAAAGA AATACTGAGA ATTATCTCGG AAAATAAAGA CATAGATGAT
AAAATAAAAG CAAAAAGGAT TTTTCTGAGC GGAGAAAAAA AAGCAGATGT ATTCCAAAAG
GACGGGATGA TTAATGTGAC AGATCATAAT TCACAGCTGA TTCCTCTTAT GAAAACCTCG
GAATTGTCCT TAAAGGGAAA ACATAACCTT GAGAATATAC TGTTTATTAT TTCTGTGGGA
ATGATTCTTA ATGTAGATAT AGAAGTAATG AAGTCATTCC TGTCTTCTAC AAAACCTCTG
GAGCACAGAC TGGAAAATTT CTTTGAAAAA GGGAAAACGG TTTTTATTAA TGATTCCAAA
GGAACGAATT CTGAGTCGAC AATTAAGGCA ATAGAAGCAT TCGGAAAATC AACGGTACTA
ATTTGCGGAG GATATGATAA ACAGGCCTCT AATAAGGAGT TAATCGATAA GATAGCAGAA
AAAGTGGAGT TTGTATATTT AATCGGGCAA ACTTCGGATA TTCTTGAAAA AGAACTGAAA
GATCAAAAGT ATACACAGTA TAAAAATCTT AAGACATTGG AAAATGTTTT GAATGATATA
AAAGATAATT TAGATTTTTC GAAAGAACAG GTAGTTTTGT TCTCTCCGGC GACTTCCAGT
TTTGACCAGT TTAAAAATTT TGAGGACAGA GGAAGAATTT TTAAAGAGCT TACAAATCAA
ATTATAGGAG ATAGATAA
|
|---|
| Protein sequence | MKNAIVFGAG LSGHGAKELL EKKGYNVFLI DDKTGIKSEE GIKIIDEQKI EFIVKSPGIP
WDAELLEKAD SLRISVISEI DLAYRYMDKK TKIISITGTN GKTTTATKIY ELLKEAGFDA
ELAGNAGFSF AKLVSDGKEP DYVVLELSSY QLENDPEVHS HIAGIINLTP DHLTRYNSLD
DYYKTKFNIF DHQNENDYAL INLDDKEILR IISENKDIDD KIKAKRIFLS GEKKADVFQK
DGMINVTDHN SQLIPLMKTS ELSLKGKHNL ENILFIISVG MILNVDIEVM KSFLSSTKPL
EHRLENFFEK GKTVFINDSK GTNSESTIKA IEAFGKSTVL ICGGYDKQAS NKELIDKIAE
KVEFVYLIGQ TSDILEKELK DQKYTQYKNL KTLENVLNDI KDNLDFSKEQ VVLFSPATSS
FDQFKNFEDR GRIFKELTNQ IIGDR
|
|---|
| |