Gene Sterm_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0115 
Symbol 
ID8595611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp122481 
End bp123671 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content36% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003306931 
Protein GI269118754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGA GATTCGCAGA CAGAATGAAC AATGCGCAAA AATCATTCAT AAGAGAGATC 
CTGAAAGTAG TGGGGAATCC CGAGATAATA TCGTTTGCCG GAGGTCTTCC GAATCCTATT
TCATTTCCCA TAAAAAAGAT ACAGGAAGCA ACAGACAAGA TACTGGAAGA AGATGGGGAA
AATATTCTTC AGTACAGCAC TACAGAAGGG TATCTTCCGC TCAGGGAATA TATATCAGAA
AGATATTTGA AAAATTCAGG TGTAGTAGTA CCTCCTGATG AAATACTTAT AACAAACGGA
TCACAGCAGG GTCTGGATCT TATAGGAAAA GTATTTCTGA ATAAAGGCGA CTGCATGCTT
ATGGAGGAGC CGGGATATCT CGGGGCAATA CAGGCATTTT CAATGTTTGA GCCTGAGTTT
AAGACAGTTC TCATGAACCA TGACGGAGTA GATACTGAAA AATTGAAAGA AAGCATAGAA
AAATATAATC CGAAATTATT TTATGCAGTA CCGAATTTTC AAAATCCGTC AGGTATTACA
TATTCTGAGG AAAACAGAAA ACAGATAGCT GGTTTTATGA AAGGCTCTGA TACGATACTC
ATAGAAGATG ATCCTTACGG AGAATTAAGA TTTATGGGCA GCAGAGTTCC GTCAATGAAA
AAATATATGA ATGATAATGT TATTCTGCTC GGTTCTTTTT CCAAGATAGT TTCTCCGGGA
ATGAGACTGG GATGGATACA TGCCGGTCAT GAAATTATGG AAAAACTAAT AATTGCCAAG
CAGGGAGCAG ATTTGCACAG TAATTATTTT TCACAGAGAG TTGTTTATGA ATATCTGAAA
GAAAATAATA TAGAAGTGCA TATAGAAAAA ATCACTGATC TCTACAAAAA ACAAAGAGAC
TGTATGGTTA ATTCAATAGA AAAGTATTTT CCAAAAGAAG TACAGACTAC AAAGCCAGAA
GGCGGAATGT TTATATGGGT AACACTTCCT GAAAAATATT CTTCAATGGA TTTGTTTAAT
ATAGCAATAA AGAAAAAAGT AGCCTTTGTA CCGGGAGATC CGTTTTATAC GGGTAAAGAA
GGGGTGAATG CTTTCAGGCT AAATTATACA AACAGTACTG AGGATAAGAT AGAGGAAGGT
ATAAAAATAC TGGCAGAGGG AATAAAAGAG CTTTTGTCGG AAAAAAATTA G
 
Protein sequence
MNLRFADRMN NAQKSFIREI LKVVGNPEII SFAGGLPNPI SFPIKKIQEA TDKILEEDGE 
NILQYSTTEG YLPLREYISE RYLKNSGVVV PPDEILITNG SQQGLDLIGK VFLNKGDCML
MEEPGYLGAI QAFSMFEPEF KTVLMNHDGV DTEKLKESIE KYNPKLFYAV PNFQNPSGIT
YSEENRKQIA GFMKGSDTIL IEDDPYGELR FMGSRVPSMK KYMNDNVILL GSFSKIVSPG
MRLGWIHAGH EIMEKLIIAK QGADLHSNYF SQRVVYEYLK ENNIEVHIEK ITDLYKKQRD
CMVNSIEKYF PKEVQTTKPE GGMFIWVTLP EKYSSMDLFN IAIKKKVAFV PGDPFYTGKE
GVNAFRLNYT NSTEDKIEEG IKILAEGIKE LLSEKN