Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0054 |
Symbol | |
ID | 8595553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 59787 |
End bp | 60812 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003306873 |
Protein GI | 269118696 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000167469 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCAA TAAAAAAATA TACTTCAGGT ATAGTACTGA CTTTTATACT TGCATATATC GGCATACTTC TGAGCAGCTT TATTCCCTAC CATCTTATAA GCGGAAGTGT TTTTGCCCTG CTTGCGGGGA TGATTCTAAA TCCGTATATA TCGGAATTCG GTTTTTTTAA GCCCGGAATA AACTTTGTTT CAAAACAAAT ATTAAGATTT TCTATTATAT TAATGGGGCT TACTCTCAGC TTTTCACAGG TACTGCAGGT AGGAAAATAT TCTCTTATTG TTATGGTTTT TACATTATTT ACTGCTTTTG GCGGCGGATG GCTTCTTGGA AAGATTTTTG GCATGAACTG GAAACTTTCA GGACTTATTT CCGCAGGAAC GGGAATCTGC GGCGGGTCAG CCATAGCTGC CATTGCTCCT GCCATAGATG CAGATATAAA GGATATTGCT TATGCTATTT CAGCTACATT TATTTTTGAT ATTTTTATGG TTATTTTATT TCCCATTGCA GGGAGATACT TTGGAATGTC AGATATCGGA TACGGACTGT GGGCTGGAAC TGCAGTAAAT GACACCTCGT CTGTTGTTGC AGCCGGATAT GCCTTTTCTG ATGCTGCCGG CGGTTTTGCG GTTATTGTAA AGCTTACCCG TACTCTTTCC ATTATTCCTG CAGTATTAAT ATTTTCTCTT ATAAACAGAC ATGTAGAATC TAGAAAGTCT GTTTCAGAAT CAGAGAAAAA AAAGAAAGAA AATATTTCAT TAAAGAATAT TTTTCCGTTT TTTATTCTGT TATTTTTAGT TATGGTCGGA ATAAAAAGTA CAGGTATAGT TCCTGAAAAT GTAAGCTCTG TAATATCACA GATCAGTAAA TATCTTATGG TAATGGCTCT TGGTGCTATC GGACTCAGAA CTAACTTTGC CGAAGTCTCG CATTCAGGCT TTAAGCCTAT GCTTCACGGC TTTATTATAT CGTTGCTTGT AGTAGTTGTT TCCTTTTGGG TTCAGATGTT TTTGGGACAG ATATAA
|
Protein sequence | MKSIKKYTSG IVLTFILAYI GILLSSFIPY HLISGSVFAL LAGMILNPYI SEFGFFKPGI NFVSKQILRF SIILMGLTLS FSQVLQVGKY SLIVMVFTLF TAFGGGWLLG KIFGMNWKLS GLISAGTGIC GGSAIAAIAP AIDADIKDIA YAISATFIFD IFMVILFPIA GRYFGMSDIG YGLWAGTAVN DTSSVVAAGY AFSDAAGGFA VIVKLTRTLS IIPAVLIFSL INRHVESRKS VSESEKKKKE NISLKNIFPF FILLFLVMVG IKSTGIVPEN VSSVISQISK YLMVMALGAI GLRTNFAEVS HSGFKPMLHG FIISLLVVVV SFWVQMFLGQ I
|
| |