| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_2806 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | + |
|---|
| Start bp | 2569122 |
|---|
| End bp | 2571278 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | glycogen debranching enzyme GlgX |
|---|
| Protein accession | ACX92888 |
|---|
| Protein GI | 261603285 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.200191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAT TCTTCAGAAC TAGAGATAGG CCTCTTCGTC CCGGAGATCC ATATCCATTA
GGTTCGAATT GGATAGAAGA TGATGATGGT GTGAATTTTT CATTATTCTC AGAAAATGCA
GAAAAAGTCG AATTACTCCT TTACTCACTG ACAAACCAAA AGTACCCAAA GGAGATAATA
GAGGTTAAAA ACAAAACGGG AGATATTTGG CACGTCTTCG TCCCGGGACT GAGACCCGGG
CAACTTTACG CATATAGGGT TTATGGCCCA TATAAACCGG AGTTGGGATT AAGGTTTAAT
CCAAATAAGG TTTTAATAGA CCCTTATGCT AAAGCCATAA ACGGTAGTGT AATTTGGAAC
GACGCGGTAT TTGGTTATAA GATAGGAGAT CAAAATCAAG ATTTGACCTA TGACGAGAGG
GATTCCGGCG AATATGTTCC TAAAAGTGTT GTGATTAATC CATACTTTGA GTGGGACGAT
GAGGATTTCA TTAAGGGAAA GAAAGTTCCA TTAAAGGATA CAGTAATTTA CGAAGTTCAC
GTAAAAGGGT TTACAAAACT TAGGTTGGAT TTGCCGGAAA ACATAAGGGG AACTTATGAA
GGTCTTGCCT CAGAACAAAT GATCAGCTAT CTCAAAGATC TAGGGATTAC TACTGTGGAA
CTAATGCCAG TTTTCCATTT TATCGATCAA AGATTTCTGA CAGATAAGGG GCTAACGAAT
TACTGGGGGT ATGACCCAAT AAATTTCTTC TCTCCTGAAT GTAGATATTC CAGTACTGGC
TGTTTAGGAG GGCAAGTATT AAGTTTCAAA AAAATGGTAA ACGAATTACA TAACGCAGGA
ATTGAGGTTA TAATCGATGT AGTTTATAAT CACACTGCTG AGGGGAATCA TTTAGGCCCA
ACGTTAAGTT TCAGAGGTAT TGATAATACA GCATATTACA TGCTCCAACC AGATAATAAA
AGATATTATT TAGACTTTAC CGGAACTGGC AATACGTTAA ATCTTAGCCA TCCTAGAGTC
ATCCAGATGG TCTTAGATAG CTTAAGATAT TGGGTTACAG AGATGCACGT AGATGGCTTT
AGATTTGACT TAGCAGCAGC TTTAGCCAGG GAATTATACA GCGTTAATAT GTTAAATACG
TTCTTCATTG CTCTACAGCA AGACCCAATA TTGTCACAAG TAAAACTGAT AGCTGAGCCT
TGGGATGTGG GACAAGGGGG ATATCAAGTA GGGAATTTCC CATATCAATG GGCAGAGTGG
AATGGAAAGT ATAGGGATTC GATAAGGAGA TTTTGGAGAG GAGAAGCGTT ACCCTATAGC
GAGATTGCTA ACAGATTATT AGGCTCGCCG GACATTTACT TAGGTAATAA TAAAACACCA
TTTGCCAGTA TAAATTACGT AACTTCTCAT GATGGTTTCA CATTAGAGGA TTTAGTCAGT
TATAATCAAA AACACAATGA AGCGAATGGA TTTAACAATC AAGATGGAAT GAACGAGAAC
TATAGTTGGA ATTGTGGTGC AGAAGGACCA ACAAATGACC AAAACGTGGT AATATGCAGG
GAGAAACAAA AAAGGAACTT TATGATAACG TTACTCGTTA GTCAAGGAAC CCCTATGATA
TTGGGAGGAG ATGAGCTAAG CAGGACACAA AGAGGAAATA ATAACGCGTT TTGTCAAGAC
AACGAGATAA CTTGGTTTGA TTGGAATTTA GATGAGAGAA AATCAAAATT TTTAGAGTTT
GTTAAAAAGA TGATCCAATT TTATAGGGCA CATCCAGCAT TCAGAAGGGA AAGATATTTT
CAAGGAAAGA AATTATTCGG CATGCCGTTA AAAGATGTGA CCTTCTATAC TCTAGAAGGT
AGGGAAGTTG ATGAGAAAAC ATGGAGTTCC CCGACGCAAC TAGTTATTTT CGTGTTGGAG
GGAAGTGTTA TGGACGAGAT TAATATGTAT GGAGAGAGAA TTGCTGATGA TTCCTTCTTA
ATAATACTTA ACGCAAATCC CAATAACGTA AAGGTGAAAT TCCCAAAAGG TAAATGGGAA
CTAGTTATCA GTTCTTATTT GAGAGAAATA AAACCAGAAG AGAGAATCAT AGAAGGTGAG
AAGGAACTGG AAATAGAGGG AAGGACGGCA TTAGTTTATA GGAGGATAGA ATTATGA
|
|---|
| Protein sequence | MALFFRTRDR PLRPGDPYPL GSNWIEDDDG VNFSLFSENA EKVELLLYSL TNQKYPKEII
EVKNKTGDIW HVFVPGLRPG QLYAYRVYGP YKPELGLRFN PNKVLIDPYA KAINGSVIWN
DAVFGYKIGD QNQDLTYDER DSGEYVPKSV VINPYFEWDD EDFIKGKKVP LKDTVIYEVH
VKGFTKLRLD LPENIRGTYE GLASEQMISY LKDLGITTVE LMPVFHFIDQ RFLTDKGLTN
YWGYDPINFF SPECRYSSTG CLGGQVLSFK KMVNELHNAG IEVIIDVVYN HTAEGNHLGP
TLSFRGIDNT AYYMLQPDNK RYYLDFTGTG NTLNLSHPRV IQMVLDSLRY WVTEMHVDGF
RFDLAAALAR ELYSVNMLNT FFIALQQDPI LSQVKLIAEP WDVGQGGYQV GNFPYQWAEW
NGKYRDSIRR FWRGEALPYS EIANRLLGSP DIYLGNNKTP FASINYVTSH DGFTLEDLVS
YNQKHNEANG FNNQDGMNEN YSWNCGAEGP TNDQNVVICR EKQKRNFMIT LLVSQGTPMI
LGGDELSRTQ RGNNNAFCQD NEITWFDWNL DERKSKFLEF VKKMIQFYRA HPAFRRERYF
QGKKLFGMPL KDVTFYTLEG REVDEKTWSS PTQLVIFVLE GSVMDEINMY GERIADDSFL
IILNANPNNV KVKFPKGKWE LVISSYLREI KPEERIIEGE KELEIEGRTA LVYRRIEL
|
|---|
| |