Gene Ssol_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2170 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1955556 
End bp1956449 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content40% 
IMG OID 
Productthiamine pyrophosphate protein domain protein TPP-binding protein 
Protein accessionACX92364 
Protein GI261602761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAGTC AAGTAACACC GAAGAGAATG CCTAAATTCT ACAGAGGAAA TGCTGCTTGT 
CCAGGCTGTC CAATACCTAA AGAGTTAGAC GTAGCCCTAG AAGTTTTAGG GAATAAGACA
GTGCTAGTAG TTCCAGCTTC ATGTACTACG ATAATAATGG GAGATACTAA TGGGATGCCT
TCAACTGTAC CAGTAGTTCA CAGTGCCTTT GGAGCAGCTG CTGCAATAGG TTCTGGGATT
GTTAGATCCC TAAGAATGAG GGGAGATAAT GACGCAATAG TGGCTGTTTG GGCTGGTGAT
GGTTCTACTG GTGATATAGG ATTTGCCGCA GTTAGTGGTG CTGCTGAGAG AAATGAGGAT
ATCCTTTACA TATGCTATGA TAACGAAGCT TATATGAATA CTGGAATTCA GCGTTCAGGC
TTAACTCCTA AGGGGGCTTG GACTACTACA ACTCCTGAAG GTAAGAGAGA GGTTAAAAAG
CCTTTACCAT TCATCATTGC AGAACATAAA GTACCATATG TTGCCACTGC GTCAATTGCT
TACATATATG ATTATGAAGC TAAGATGAGG AAAGCTAAAC AGATTCGAGG ATTTAGATAT
ATACACTTAT TGTCCCCATG TCCACCTGGT TGGCGTTTCG ATTCTAAATT AACTATCGAT
ATTGCAAAAC TTGCAGTTGA GACTGGAGTT TGGCCACTCT TTGAAATAGA AAATGGTGAA
TTTAAACTAA CTAGTGTGAG TAAGACGTTA GTTGAGAAGA AGAATAGGAA ACCAGTAGCG
GAGTATTTAA AATTACAAGG AAGATTTAAA CAGCTCACTG AAGAACAAAT AAAGGGCATA
CAAGAGGAGA TTGACGAGAT GTGGGAGGAA ATTAAAAGAC TAATTAAGAA GTAA
 
Protein sequence
MSSQVTPKRM PKFYRGNAAC PGCPIPKELD VALEVLGNKT VLVVPASCTT IIMGDTNGMP 
STVPVVHSAF GAAAAIGSGI VRSLRMRGDN DAIVAVWAGD GSTGDIGFAA VSGAAERNED
ILYICYDNEA YMNTGIQRSG LTPKGAWTTT TPEGKREVKK PLPFIIAEHK VPYVATASIA
YIYDYEAKMR KAKQIRGFRY IHLLSPCPPG WRFDSKLTID IAKLAVETGV WPLFEIENGE
FKLTSVSKTL VEKKNRKPVA EYLKLQGRFK QLTEEQIKGI QEEIDEMWEE IKRLIKK