Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_2054 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 1843131 |
End bp | 1843808 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | ACX92260 |
Protein GI | 261602657 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.198062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTAA TAAGACTTGA AAATGTTACC AAGATCTATG AGGGGAATGT TAAGACTATT GCACTTAGAG ATATAAACCT AAGTATTGAT GAAGGGGAGT TTATTTCAAT ATTAGGACCT TCTGGCAGTG GAAAATCTAC TCTCTTATCA ATCTTAGGAA TTTTGGATAG ACCATCACAA GGAAAGGTAT ACATTTACGA AGTTGACGTA ACTAAACTAA GTGATAACGA GATCTCTAAA ATTAGAAACG AATACATAGG CTTTGTGTTT CAGAATTTCA ATCTAATTCA AAGACTTAGT GTTCTACAAA ACGTTGAGTT ACCATTAGTA GCTAGAGGAA TACCAAAAAA GAAAAGAGAG GAAATTGCGA TAAATTCTCT AAAACTAGTG GGATTAGATG GATTAATAAA TAAAAAACCA TCTGAACTTT CTGGAGGACA GCAGCAAAGA GTTGCCATAG CTCGTGCATT AGCACAAAAT CCAAAGATCA TATTAGCTGA TGAACCTACC GGAAATTTGG ATAGTAGTAA TGCAAAAATT GTAATGAACA TATTCAAAAA GATTAACGAG GAGTTTAAAA CTACGATAGC AGTAGTAACA CATGATAGAG AAGTTGCGAG TTATACAAAG AGAAAGATAT ACATTAGAGA TGGAAAGATA GTTGGTGAAG AAAGATGA
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Protein sequence | MSVIRLENVT KIYEGNVKTI ALRDINLSID EGEFISILGP SGSGKSTLLS ILGILDRPSQ GKVYIYEVDV TKLSDNEISK IRNEYIGFVF QNFNLIQRLS VLQNVELPLV ARGIPKKKRE EIAINSLKLV GLDGLINKKP SELSGGQQQR VAIARALAQN PKIILADEPT GNLDSSNAKI VMNIFKKINE EFKTTIAVVT HDREVASYTK RKIYIRDGKI VGEER
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