Gene Ssol_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2000 
Symbol 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand+ 
Start bp1795678 
End bp1796421 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content39% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionACX92210 
Protein GI261602607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAG TTGCTATTGT AACCGGAGCA TCAAAAGGTA TAGGGAGAGC TGTTGTTAAG 
TTACTTAAGG AGAATAATTA TACTGTTGTT TCGATTTCTA GGAGTAAATC GGATATTGGT 
GATGTAATTT ATGATGCTGA TGTCAGTGAT AGGAGCACTG TATTTAGGAT TGTAAATGAG 
GTACTGGAGA AGTTTGGCAA GATTGACGTC TTGGTTAATA ATGCAGGTTT TGGAGTTTAT 
GGATCTTTTT TAGAGACTGA TTTAAACGAG GAGGAGTACA TGATTAGGAC TAATCTTCTA 
GCCCCACTAT ACTTCATGAA GGCCGTGCTT CCACATATGG TTTCTAGGAG GAAGGGAAGT 
GTTGTTAACA TCGTTTCGGA AGCTGCTTAC GTATCTACAC CCAAGCTTTT AGTTTACTCG 
GCAACTAAGG CTGGTTTAGC CAGTTTAACT AATGGCTTGT GGGCTGAAAT GAGGAAATAT 
AATGTTAGGG TAAGTGGTGT TTACCCTGGC CCTGTCAGGA CTAATTTTAC CTCTCATCCT 
TCATTTAAAA AGAATAATGG CGATCCTTTT GCTAATTATA GCGTTGAGCC AGAGGCTGTA 
GCTAAAGCCG TTCTAAAAGC AATAAGGACT GGTAAGAGGG AGATTTATGT ACCTTCAAGG 
TTGAAATTGG ACCCCTATTT CCTTAAGCTT GCTAACCTTT TCCAGAGTTT CACTTATACT 
ATAGTAAGTA ATTATTTTAG CTAA
 
Protein sequence
MSEVAIVTGA SKGIGRAVVK LLKENNYTVV SISRSKSDIG DVIYDADVSD RSTVFRIVNE 
VLEKFGKIDV LVNNAGFGVY GSFLETDLNE EEYMIRTNLL APLYFMKAVL PHMVSRRKGS 
VVNIVSEAAY VSTPKLLVYS ATKAGLASLT NGLWAEMRKY NVRVSGVYPG PVRTNFTSHP 
SFKKNNGDPF ANYSVEPEAV AKAVLKAIRT GKREIYVPSR LKLDPYFLKL ANLFQSFTYT 
IVSNYFS