Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1996 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1790778 |
End bp | 1791731 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | formate hydrogenlyase subunit 4 (HycD) |
Protein accession | ACX92206 |
Protein GI | 261602603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.503426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCCAA ATGAAGCTCA GATAGTAGTT TTAACCATAA CTCAAGTTAT TGTAGTTATT CTACTATCCC CATTATATCA AGGAATTTAC GATAGGGGAA AAGCCATAAT AGAAGGGCGT AAAGGCCCCA GTGTTCTGCA ACCTTACTAT GATATAATTA AACTACTAAG AAAAGAAACC GTTATTTCAA ATAACTCATT ATCTCTATTT GTTTATGCTC CTTACATAGT TTTTGGGATT TATCTCCTTA TTTCCTTCGT CATCCCAGTA GTTTATCCAG TGCCCATCTT ACTCACCCCT ACGGTGGATT TCTTAGGGGG AGCATTACTC TTCTCCTTAG CTGCGTTCAT AAAAATAATT GCCTCCCTAG AAAGTGGAAG TAATTTCGTA GCATTAGGAG TAAGTAGAAT TCTCTCTTTC ACTTTCTTAT CTGAAGCTAC ACTGATAACG GTTTTCTTCG GCGTTGCACT AATAACTGGT ACAAACAACC CTTACGTAAC ATTAGATTAC GTTTCCCAAA GCCTCTCTCA TTACTTTCAA CTAGACCACA TCTTCGTATC GATCTCATTC TTCATGTTAT GGTTATTCGA AACCGGTAAA TTACCCGTAG AGAGTCCTGG ACTAAGCGAA ATGGGTATGA TAGACGATGG AGTTCTCTAC GAATATAGCG GAAAATTACT TGCAATACTA AAGTGGGGTT CTTACATCAA ACAATATCTA TTAGGCTCAG TACTCCTAAA CGTATTTATA TTCCCTTGGT TTTTGCAAGT TGGAATTATA GGCTCTTTAA TAGACATTGC GGTGATGTTC GGCAAATGGT TACTCCTAAT CCTTATTAGC GTTATAATAA ACACCACCCT AGCTAAATTA AGGCTATTTA AAGTTCAGGA TTATCTCGCA GTGGCGTTCC TCCTTTCCCT ACTTTCATTA ACGCTTACTG TCTTGTTGGG GTGA
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Protein sequence | MAPNEAQIVV LTITQVIVVI LLSPLYQGIY DRGKAIIEGR KGPSVLQPYY DIIKLLRKET VISNNSLSLF VYAPYIVFGI YLLISFVIPV VYPVPILLTP TVDFLGGALL FSLAAFIKII ASLESGSNFV ALGVSRILSF TFLSEATLIT VFFGVALITG TNNPYVTLDY VSQSLSHYFQ LDHIFVSISF FMLWLFETGK LPVESPGLSE MGMIDDGVLY EYSGKLLAIL KWGSYIKQYL LGSVLLNVFI FPWFLQVGII GSLIDIAVMF GKWLLLILIS VIINTTLAKL RLFKVQDYLA VAFLLSLLSL TLTVLLG
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