Gene Ssol_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1996 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1790778 
End bp1791731 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content38% 
IMG OID 
Productformate hydrogenlyase subunit 4 (HycD) 
Protein accessionACX92206 
Protein GI261602603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.503426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCAA ATGAAGCTCA GATAGTAGTT TTAACCATAA CTCAAGTTAT TGTAGTTATT 
CTACTATCCC CATTATATCA AGGAATTTAC GATAGGGGAA AAGCCATAAT AGAAGGGCGT
AAAGGCCCCA GTGTTCTGCA ACCTTACTAT GATATAATTA AACTACTAAG AAAAGAAACC
GTTATTTCAA ATAACTCATT ATCTCTATTT GTTTATGCTC CTTACATAGT TTTTGGGATT
TATCTCCTTA TTTCCTTCGT CATCCCAGTA GTTTATCCAG TGCCCATCTT ACTCACCCCT
ACGGTGGATT TCTTAGGGGG AGCATTACTC TTCTCCTTAG CTGCGTTCAT AAAAATAATT
GCCTCCCTAG AAAGTGGAAG TAATTTCGTA GCATTAGGAG TAAGTAGAAT TCTCTCTTTC
ACTTTCTTAT CTGAAGCTAC ACTGATAACG GTTTTCTTCG GCGTTGCACT AATAACTGGT
ACAAACAACC CTTACGTAAC ATTAGATTAC GTTTCCCAAA GCCTCTCTCA TTACTTTCAA
CTAGACCACA TCTTCGTATC GATCTCATTC TTCATGTTAT GGTTATTCGA AACCGGTAAA
TTACCCGTAG AGAGTCCTGG ACTAAGCGAA ATGGGTATGA TAGACGATGG AGTTCTCTAC
GAATATAGCG GAAAATTACT TGCAATACTA AAGTGGGGTT CTTACATCAA ACAATATCTA
TTAGGCTCAG TACTCCTAAA CGTATTTATA TTCCCTTGGT TTTTGCAAGT TGGAATTATA
GGCTCTTTAA TAGACATTGC GGTGATGTTC GGCAAATGGT TACTCCTAAT CCTTATTAGC
GTTATAATAA ACACCACCCT AGCTAAATTA AGGCTATTTA AAGTTCAGGA TTATCTCGCA
GTGGCGTTCC TCCTTTCCCT ACTTTCATTA ACGCTTACTG TCTTGTTGGG GTGA
 
Protein sequence
MAPNEAQIVV LTITQVIVVI LLSPLYQGIY DRGKAIIEGR KGPSVLQPYY DIIKLLRKET 
VISNNSLSLF VYAPYIVFGI YLLISFVIPV VYPVPILLTP TVDFLGGALL FSLAAFIKII
ASLESGSNFV ALGVSRILSF TFLSEATLIT VFFGVALITG TNNPYVTLDY VSQSLSHYFQ
LDHIFVSISF FMLWLFETGK LPVESPGLSE MGMIDDGVLY EYSGKLLAIL KWGSYIKQYL
LGSVLLNVFI FPWFLQVGII GSLIDIAVMF GKWLLLILIS VIINTTLAKL RLFKVQDYLA
VAFLLSLLSL TLTVLLG