Gene Ssol_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1428 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1319164 
End bp1319874 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content37% 
IMG OID 
ProductAlanyl-tRNA synthetase, class IIc-like protein 
Protein accessionACX91661 
Protein GI261602058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAG AACTCTATCT AAAGGATTCT TACATTAAAG AATTCGAGGG AAGAGTAGTT 
AGGATAGAAG GTAACTACGT AATACTTGAT AAGACAGCTT TTTATCCAGG TGGAGGAGGT
TTAGATAACG ATACTGGATT CCTAGTCAAT GAGAAAGGGG AGAGAATAAG CGTTACTGAG
GTAAAAAGGG GAGAAAACGG AGAGATTTTA CATAAGATAG ATCAAAATGG TTCCCTTAAT
GTTAATGAAA AAGTTATAGG CACAATAGAT TGGGACAGAA GATATAGAAT GATGCGATTA
CATACCGCTT CGCATATAGT CGCTGCATTG GCTTATAGAA AATTCGGAGC TTTGATAACC
GGAGGGCACA TTAGCCCAGA ACAAGCTAAG GACGATTTTA ATGTTGAAAA TAAAGATACC
CTTATTGAGT TAATAAATGA AGCTAACGAA ATAATCAAAA AAGACATAGA GTTGAAGATC
TATTTTCTAC CTAGGGAAGA AGCTCTAATG ATACCAGCTA TAGTGAAACT AGCTGGAAGA
AATCCACCAC AGATTCCCAT ATGGCGAATT GTTGAGATTC CGGGTATAGA TATCCAAGCT
GATGGTGGAC CTCACGTTAA GAATACCAAG GAAATAGGAG AAATAGTATT ACTTAAAGTT
GAAAACAAAG GGAAAGGGAG AAAGAGAGTT TACTATACTG TTAAACCATA G
 
Protein sequence
MTEELYLKDS YIKEFEGRVV RIEGNYVILD KTAFYPGGGG LDNDTGFLVN EKGERISVTE 
VKRGENGEIL HKIDQNGSLN VNEKVIGTID WDRRYRMMRL HTASHIVAAL AYRKFGALIT
GGHISPEQAK DDFNVENKDT LIELINEANE IIKKDIELKI YFLPREEALM IPAIVKLAGR
NPPQIPIWRI VEIPGIDIQA DGGPHVKNTK EIGEIVLLKV ENKGKGRKRV YYTVKP