| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_1156 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | + |
|---|
| Start bp | 1074625 |
|---|
| End bp | 1076934 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | AAA family ATPase, CDC48 subfamily |
|---|
| Protein accession | ACX91394 |
|---|
| Protein GI | 261601791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCTA GTTCTGGAGA GGAACAGAAG CCGCAAAGAA AGGAGTTAAT ACTTAGAGTA
ATGGAAGCAA GACAAAAAGA TGTCGGGAGA GGGAAAGTAA GAATTGATAT TGATTTACTC
TCACAAATTG ATGTAAGCCC GGGTGATGTA GTCGAAATTG AAGGAACCAG AAAGACCGCT
GCGCTTGCAT GGCCTTTGTC GCCAGAAGAT ACAACAACTG GAGAAAAAGA CATAATAAGA
ATGGATGGAA TTACTAGGAA AAACGCTGGT GTCTCGATTG GAGATAAGGT TATAGTACGG
AAAGCAATTG TAAAACCAGC CAGCACAGTA AAATTAGCAC CATCTAACTT CTCAATTACC
GTAGATCCAG GTTTCATCAG TTATGTTAAG AAACGATTAA AAGAATTCCC CCTAGTTGAA
GGGGATACAG TATTAATTCC AGTTCTAGGA CAAGCTATAC CGTTTACTGT GGTTCAAGTC
AAACCTGCAG GTATAGTTCT AGTAAATGAC GATACAATAA TAAGCATATC TGATAAGCCA
GTAGAACCTT CCAGATATCC CAGAGTTACC TATGAAGATA TAGGTGGAAT GAAAAATATT
ATAGAAAAAG TTAGAGAGTT AGTAGAACTA CCCTTAAGAC ATCCAGAACT GTTCAAGAGA
TTAGGAATAG AACCGCCTAA GGGCATACTA CTATATGGCC CACCTGGAGT TGGAAAGACG
TTACTCGCTA AAGCTATAGC TAACGAGACT GATGCCTACT TCACTTCAAT TAATGGACCA
GAAATAATGA GTAAATTCTA TGGGGAAAGT GAGCAAAGAT TAAGAGAAAT ATTTGAAGAT
GCCAAAAAAC ATGCTCCTGC GATAATATTC GTAGATGAAA TAGACGCAAT AGCACCGAAA
AGAGACGAAG TAATAGGAGA AGTAGAAAGA AGAGTTGTTG CACAGTTACT CACCCTAATG
GATGGACTTG AAAATAGAGG AAACGTGATA GTTATAGCAG CTACCAATAG ACCTAGTGCT
GTTGATCCAG CATTAAGAAG ACCGGGAAGA TTTGATAGGG AAATAGAAAT ACCATTACCA
GATAAGCAAG GAAGATTAGA AATATTACAA ATCCACACAA GGAATATGCC ATTATCTAAG
GATGTTGACC TAGAAAAGCT TGCAGATATG ACACACGGAT ATACTGGTGC TGATTTGTCT
GCATTAGTAA GAGAAGCTGC AATGAATTCC TTAAGAAGAT ATTTACCAAA GATAGATTTG
AACCAAGATA AGATACCTCC AGAGATATTA GAGTCTATGG AAGTTAAGAT GGAGGATTTC
ATAAATGCAT TCAAGGAAAT AGTACCGAGT GGCTTAAGGG AAATTTACAT AGAAGTTCCT
GAGGTTAAAT GGACAGATAT AGGTGGACTT GAAGAAATAA AAGAAGAGCT AAAAGAAGTA
GTTGAATATC CCTTGAAATA CTCAGAGCTA TACCAAAACT CTGGTATAGA GCCACCTAAG
GGTATATTGT TATTTGGTCC ACCCGGAACT GGAAAGACAA TGCTAGCGAA GGCTGTGGCG
ACTGAAAGCG GAGCAAATTT CATAGCAGTG AGAGGGCCAG AAATATTATC CAAATGGGTA
GGTGAAAGTG AAAAAGCAGT TAGAGAAATA TTTAGAAAAG CTAGAATGTA TGCTCCAGCT
GTAATATTCT TTGACGAAAT AGATTCAATA GCGCCAATAA GGGGAATTTC TTATGATTCC
GGAGTAACAG AGAGAATAGT AAATCAGCTA TTAGCGGAAA TGGATGGAAT AGAAAAATTA
GAGAATGTGG TAGTTATAGC TGCAACTAAT AGACCAGATA TCTTAGATCC AGCATTGCTA
AGACCCGGTA GGTTTGAGAA ATTAATCTAT GTACCCCCAC CAGATAAGAG GGCAAGGACA
GAAATATTAA AGGTGCATAC TAGGAACATA GCGCTAGGTG AGGATATCAG CTTAGAGGAC
GTAGCTGAAA AGACTGAAGG CTACACCGGA GCTGACTTAG CAGCGTTAGT AAGAGAAGCT
ACAATGAGAG CTATAAGAGA GAGCATGAAA ATATGTATAG ATAAGACTAA CGAGAATTGT
AAACCTACAG ATGCTGAATG CAGAGATAAG ACTATGAAAG AATGTATGAA GGTTAACGGG
GTTAAGGTTT CCCTAAGACA TTTCGAAGAG GCTATGAGGA AAGTTAAACC ATCAGTTACA
CAAGATATGT TGCAATTCTA TCAAAATTGG GTGGAAAAAG CTAGGCAACA ATTGCCAAAA
ACTACTGTTA AACCAAGTAC ATATGCGTGA
|
|---|
| Protein sequence | MSASSGEEQK PQRKELILRV MEARQKDVGR GKVRIDIDLL SQIDVSPGDV VEIEGTRKTA
ALAWPLSPED TTTGEKDIIR MDGITRKNAG VSIGDKVIVR KAIVKPASTV KLAPSNFSIT
VDPGFISYVK KRLKEFPLVE GDTVLIPVLG QAIPFTVVQV KPAGIVLVND DTIISISDKP
VEPSRYPRVT YEDIGGMKNI IEKVRELVEL PLRHPELFKR LGIEPPKGIL LYGPPGVGKT
LLAKAIANET DAYFTSINGP EIMSKFYGES EQRLREIFED AKKHAPAIIF VDEIDAIAPK
RDEVIGEVER RVVAQLLTLM DGLENRGNVI VIAATNRPSA VDPALRRPGR FDREIEIPLP
DKQGRLEILQ IHTRNMPLSK DVDLEKLADM THGYTGADLS ALVREAAMNS LRRYLPKIDL
NQDKIPPEIL ESMEVKMEDF INAFKEIVPS GLREIYIEVP EVKWTDIGGL EEIKEELKEV
VEYPLKYSEL YQNSGIEPPK GILLFGPPGT GKTMLAKAVA TESGANFIAV RGPEILSKWV
GESEKAVREI FRKARMYAPA VIFFDEIDSI APIRGISYDS GVTERIVNQL LAEMDGIEKL
ENVVVIAATN RPDILDPALL RPGRFEKLIY VPPPDKRART EILKVHTRNI ALGEDISLED
VAEKTEGYTG ADLAALVREA TMRAIRESMK ICIDKTNENC KPTDAECRDK TMKECMKVNG
VKVSLRHFEE AMRKVKPSVT QDMLQFYQNW VEKARQQLPK TTVKPSTYA
|
|---|
| |