Gene Ssol_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1090 
Symbol 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand- 
Start bp1021350 
End bp1022060 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content34% 
IMG OID 
ProductDNA-(apurinic or apyrimidinic site) lyase 
Protein accessionACX91333 
Protein GI261601730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.311677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGCA CTGCTGAAAC GATTTTCCAT AAACTTTCTG CTACCTATAT TATAAAAGAG 
GAGGATTTTA TTGCGTATTA TGTCTGGCTT AAGACCAAAG ATTGTTTTAA AGTACTTGTA 
GCAACTATTT TATCTCAAAA TTCTACAGAT AAATCAGCCA TTAAAGCCTA TCTAGAGTTA 
GAAAGAAAAG TTGGTGTTAC TCCAGAGAAA TTATCTAACG CCAATTTGGC TGACATAGAA 
AGCGCGTTAA AGATTTCCGG TCTTTATAGA ACTAAGGCTA AAAGATTAAA GGAAATTTCA 
AGGATAATTC TTGAGAGGTA TAATGGATTA ATAGATAGTT TGTTAAATAC TAGCAATGCG 
AGAGATGAAT TATTAAAACT TGAGGGAATT GGAGAGAAGA CTGCGGATGT AGTGCTATTG 
ACTTGTTATG GATATTATGG ATATAAGGTC TTTCCGGTTG ATACGCACAT AACTAGAGTC 
AGCAAAAGGT TAGGGATAGT CCCCACTAAC GCTAAATATA GTTTAATTTC ATCTACTTTA 
AAAGAACTTT TTTCAGCCTA TGATCTCCTC CATCTTCATC ACATGTTAAT TGCACATGGT 
AGACAAACTT GTAAGGCTAG GAAACCTTTA TGTAATTCTT GTATAATTAA AGAATGTTGT 
GAGTACTATT CGCATAGAGA TGGAGAAGCT TGGAGATCTA ATACCTCATG A
 
Protein sequence
MKCTAETIFH KLSATYIIKE EDFIAYYVWL KTKDCFKVLV ATILSQNSTD KSAIKAYLEL 
ERKVGVTPEK LSNANLADIE SALKISGLYR TKAKRLKEIS RIILERYNGL IDSLLNTSNA 
RDELLKLEGI GEKTADVVLL TCYGYYGYKV FPVDTHITRV SKRLGIVPTN AKYSLISSTL 
KELFSAYDLL HLHHMLIAHG RQTCKARKPL CNSCIIKECC EYYSHRDGEA WRSNTS