Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1087 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1016783 |
End bp | 1019410 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | DEAD/H associated domain protein |
Protein accession | ACX91330 |
Protein GI | 261601727 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.414576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCAATA CTTACTTCTA CTCTGATGAA GAAATATACA ATTTACTCAG ACCATATGTA GCCAAATGGT TTAGGCAGAA ATATACCACG TTTACTCCTC CTCAAAGGGC AGCTATACCG TTAATAAAGC AGAACTACAA CGTATTAGTA TCGAGTCCTA CAGGAAGTGG AAAAACTTTA GCTGCATTTC TAGGAATTTT AGATTCGTTA TTTGAGTTAG GTGATAACAA TGAGTTAGAA GATAAGGTTT ATGCGATTTA CATTTCTCCG TTAAGGGCGT TAAATAACGA CATGCAAAGA AACCTATTAG AACCTCTTAA TGAGTTAAGG CAAGTAAACT CAAAATTACC AGATGTTAGA GTTGGAATAA GAACTAGCGA TACCACACCC TATGAAAAGC AGAAAATGCT AAAGAAACCG CCTCATATTT TAATAACAAC GCCAGAGTCT TTTGGAATAT CTATAACTTC ACCTAAGTTT AGTCAGAAAT TAACCGATGT GAAATGGATT ATAGTTGATG AAATTCATGA ACTAGCTAAC AGTAAAAGGG GAGCTTATCT TTCCGCTATG TTAGAACTAT TTAGAAATCT AATTACTAAG AAAGAATTTG TGAGAATAGG CTTAAGTGCA ACTGTATCGC CTCTCGAAGA AGTGGCGCAA TTTCTCGTGG GCAAAGATCG TGAATATAGG ATAGTCGATG CTAGATTTGT AAAGCCTGTT GATATTAAAG TAATTTCCCC TGTTAAAGAT TTAGTTCACT CTTCTGAAAG TGAGGTAGAC AAGGGAATAT ATAAGACCAT CTTGAACGAA GTAAAGAAAC ATAGGACTAC TCTTATTTTT ACAAATACTA GACACGCTAC AGAGAGAGTT GCATATAAGT TAAGAAAGTT AGCTGAAAAT GAAAAGGTCT TTGATGTAGA TGCGATAGAA GCTCATCATA GCAGTCTTAG CAGAGATGTG AGATTAGATG TGGAAGAGAA GCTTAAAAAG GGAATTTTAA AAGTTGTTGT ATCGTCAACT AGTCTAGAAT TAGGGATAGA TATAGGTTAC ATTGACCTAG TTATCCTACT AAGTAGTCCT AAGAGTGTAA GTAGGTTATT ACAAAGGATA GGGAGGGCGG GTCATCATAT AAGAAGCATT AGCAAAGGGA GAGTGATTGT TGTTGACAGA GATGATTTAG TTGAGTGTTC AGTGTTAGCT AAGTTAGCTA GAGATAGGAA GATCGATAGT ATCCACATTC CTAAAAACCC CTTAGACGTC TTATCACAGA TAATAGTATC TGCTAGTTTA ATTTCTCCCA TAGATAGGGA TGATTTGTTT AAAATTTTAA GGCGATCTTA TAATTTTTCA GATCTTAGCG AATCTGACTA TTCTTTAGTA TTAAGATATC TTAGTGGGGA TTTCTTTGGA GTCGAGTTAA AGAATGTCTA CGCAAAAATA AGAATAAAAG AAGAAAAGAT AATTTATCCC AAGAAAGGTA GTAGATTAAT ATTTTATACG AATAGTGGTA CAATTCCGGA TGAGGCTATG ATAAGTGTAG TTACAGAAAA CAATAGATAT GTTGGTAATC TAGAAGAGGA ATTCGTTGAA ATATTATCAC CTGGAGATAT CTTCGTATTA AGTGGGAGAA CTTATGAATT TATTGGAAGC AAGGGTTCGA AAGTAATTGT AAAGGAGGCT ATGGGTCAAA GGCCAACGGT TCCAAGCTGG TTTTCAGAAA TGTTACCATT GGCCTACGAG TCAGCTCTAG AGATTGGCAA GTTTAGAAGA GAGATAGCAG AGATGATTAA GAAAGGAGTA ACACATAACG AGATAATAGA AAGCATCTCT AAGGAATATG AAATTGACAA ACACGCTTCC ATGTCAATAT ACACCTATAT TTTAGAGCAA TACCTTTTCA CAAACGGAAA AGTTCCTTCT GACAATCTAA TTTTAATAGA AATTTACGAT GATGAAGAAG GAATTAGAAA TTATATATTC CACGCATTGT ACGGAAGAAG AGCGTTGGAT GCTCTTTCTA GGGCTTTTGC ATACGTAGTT AGTGAGGAAT TAGATACAGA TGTTAGAGTT TCTGTTACTG ACAATGGATT TGCACTTAGT GTAAAACGAG ACGTTCCATT TGATTATAAC ATCAAGAGTC TGTTTGAAAA GATTACCCCA GATAATGTCT ATGATATTGT TACAAGGGCT GTTATGAGGA CAGAAATGCT AAAGAGAAGA TTTAGACACT GCGCAGAGAG GTCGTTTATG ATATTACGCA GATATAAAGG AAGAGAGACC AATCTAGAGA GGAGAGAATT AAATTCGGAG ATACTGTTAA AGGCTATAAG AGAAATTGGA AATTTCCCAG TAATGAAGGA GACTATTAGA GAGATTTTAG AAGACCATAT GGATATACTA AGAGCTAAGG AGATTCTGAA AAAAATTGCT AGTCAAGAAA TAAAAGTTGA TGTGTTTGGG CCCACAAATA TTCCCAGTCC GTTTTCCCAT AGTATAATTC TTAAAGGGCA TTCAGATGTA GTACTAGCAG AAGATAGAAG GGAACTACTG AAGAAGCTTC ATGAGAGAGT GGTAGAGTTC TTGAGACAGA AGGGAGTGAA TATCGAGCTC GAGTATACTT CCGTTTAA
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Protein sequence | MSNTYFYSDE EIYNLLRPYV AKWFRQKYTT FTPPQRAAIP LIKQNYNVLV SSPTGSGKTL AAFLGILDSL FELGDNNELE DKVYAIYISP LRALNNDMQR NLLEPLNELR QVNSKLPDVR VGIRTSDTTP YEKQKMLKKP PHILITTPES FGISITSPKF SQKLTDVKWI IVDEIHELAN SKRGAYLSAM LELFRNLITK KEFVRIGLSA TVSPLEEVAQ FLVGKDREYR IVDARFVKPV DIKVISPVKD LVHSSESEVD KGIYKTILNE VKKHRTTLIF TNTRHATERV AYKLRKLAEN EKVFDVDAIE AHHSSLSRDV RLDVEEKLKK GILKVVVSST SLELGIDIGY IDLVILLSSP KSVSRLLQRI GRAGHHIRSI SKGRVIVVDR DDLVECSVLA KLARDRKIDS IHIPKNPLDV LSQIIVSASL ISPIDRDDLF KILRRSYNFS DLSESDYSLV LRYLSGDFFG VELKNVYAKI RIKEEKIIYP KKGSRLIFYT NSGTIPDEAM ISVVTENNRY VGNLEEEFVE ILSPGDIFVL SGRTYEFIGS KGSKVIVKEA MGQRPTVPSW FSEMLPLAYE SALEIGKFRR EIAEMIKKGV THNEIIESIS KEYEIDKHAS MSIYTYILEQ YLFTNGKVPS DNLILIEIYD DEEGIRNYIF HALYGRRALD ALSRAFAYVV SEELDTDVRV SVTDNGFALS VKRDVPFDYN IKSLFEKITP DNVYDIVTRA VMRTEMLKRR FRHCAERSFM ILRRYKGRET NLERRELNSE ILLKAIREIG NFPVMKETIR EILEDHMDIL RAKEILKKIA SQEIKVDVFG PTNIPSPFSH SIILKGHSDV VLAEDRRELL KKLHERVVEF LRQKGVNIEL EYTSV
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