Gene Ssol_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0939 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp880102 
End bp881850 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content40% 
IMG OID 
ProductCl- channel voltage-gated family protein 
Protein accessionACX91184 
Protein GI261601581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.564922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAT CCTCATTACC CTATTTCGAG AAGTGGTTTA TCCTAGGAAT AGTTTTAGGT 
GTAGTAGCAG GGCTAGCAGC AACTACATTC TACTTACTAT TACATGTGTT TGAGGACATA
TTTTTATTTC ATCTTATTGG GATGAGTTAT CCTAGACCAC TTGGTGAGGG AGGAACATTA
AATTTTGTCT TTCATCCCGG GAACTACCTT CTTATACCCA TTTCAACAGC GATTGGCGGT
TTAATTTCTG GACTAATCGT TTATACTTTC GCCCCAGAGG CTGAGGGACA TGGTACGGAT
GCAGCAATAA AGGCTTATCA TTATTTTCAA GGCAAGGTAA AATGGGTAGT TATTCCAGTT
AAAATAATAG CTTCCGCTAT TACAATAGGT TCTGGAGGTA GTGCAGGTAG AGAAGGACCA
ACTGCGCAGT TTTCAGCTGG AGTAGGCTCT GTTATTGCTG ACTTACTACA TCTTAGTCCA
GAGGATAGAA GAAGGGCAGT AGCTGTAGGC ATTGGAGCTG GAATAGGTAC AATCTTTAAA
ACACCAATTG GAGGGGCTAT CTTAGCCGCT GAAATTCTAT ATAGGAGGGA TTTAGAACCA
GAAGTAATAT ATCCTGCATT AATAGCCTCA GCAATAGGTT ATACCATTTT CGGAAGTATA
TTTGGTTTTA CGCCAGTTTT CGGTTATTAC ACTGGAACTT TTGACCCACT AAGGTTGCCA
ATGTATGCAG TCTTAGGCCT AGTTTCTGGT TTAGTGGCAA TATTATATCC TAAGACCTTC
TATGGAATTA ATTCGCTCTT TAAAAAATTA CGAATAACCG ATCACGTGAA ACCAGCAATA
GGTGGGCTTG TCACTGGAGT AATTGCATTA TTAGCTCCAG AGATCCTTGG CACTGGGTAC
GGTTGGATTA ACCTGGTGGA ATATGAGAAG TTTTTCGCAC TATATTCCCC AGTGCTCCCG
GCGATTATAT TAATAGTAAT ATTACCATTT TTAAAAATCA TAGCGACTTC ATTCTCTGTA
GGTTCTGGTG GCAGTGGTGG AGTTTTCGCT CCGGGGTTAT TTATAGGTGC ATATATAGGC
GCAAGTATTG GATTAATGTT CCACTATTTA TTTCCAAGCG TTGTGCCCGA CATAGCTCCA
TTCGTTATCA TAGGTATGAT GAGCTTCTTT GCTGGGGCGG GAAAGGTCCC CTTATCAGTT
CTAATAATGG TAACAGAAAT GACCTCAAGT CTTCAGTTAC TGCCGGGTGC TATGGTTGCT
GTCGCTATTT CCTATTTAGT TTCCGGAAAT AGTACAATAT ATATTTCTCA ACTGCCAACG
AGAAGGGACT CCCCAGCTCA TAAAGCTGAA TATGAAACTC CATTAATGGC TACTATACGT
GTGGAAAATT GTGAATTGAA AGATATAAAG GTTCACGCTG ATGATAAGGT GGATAAAGCT
ATAAGAATAA TGATTGAGAA CAGTTTTATG AGTCTACCGG TGGTTAATTA TGATAATACA
TTTCTAGGCG TAGTCTATTT AAGAGATTTA GAAAAGGTTG ATCCAGAATC CCAACTGGGA
AAATATATAA CTAGGGGTTC TCCTTCCGTA TCTTTAACAT CCACATTGGA ACACGCATTA
GAGGTGATGG CTACTAACAA GACTAGGTGG GTTGCAGTTG TGGATAAGGG TAAGTTTCTA
GGAATTTTAA CATACGATGG AATTATAGAA GCGTATAAGA GGGAGTTAAG TACCGTTAAG
AATTCATGA
 
Protein sequence
MNLSSLPYFE KWFILGIVLG VVAGLAATTF YLLLHVFEDI FLFHLIGMSY PRPLGEGGTL 
NFVFHPGNYL LIPISTAIGG LISGLIVYTF APEAEGHGTD AAIKAYHYFQ GKVKWVVIPV
KIIASAITIG SGGSAGREGP TAQFSAGVGS VIADLLHLSP EDRRRAVAVG IGAGIGTIFK
TPIGGAILAA EILYRRDLEP EVIYPALIAS AIGYTIFGSI FGFTPVFGYY TGTFDPLRLP
MYAVLGLVSG LVAILYPKTF YGINSLFKKL RITDHVKPAI GGLVTGVIAL LAPEILGTGY
GWINLVEYEK FFALYSPVLP AIILIVILPF LKIIATSFSV GSGGSGGVFA PGLFIGAYIG
ASIGLMFHYL FPSVVPDIAP FVIIGMMSFF AGAGKVPLSV LIMVTEMTSS LQLLPGAMVA
VAISYLVSGN STIYISQLPT RRDSPAHKAE YETPLMATIR VENCELKDIK VHADDKVDKA
IRIMIENSFM SLPVVNYDNT FLGVVYLRDL EKVDPESQLG KYITRGSPSV SLTSTLEHAL
EVMATNKTRW VAVVDKGKFL GILTYDGIIE AYKRELSTVK NS