Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0396 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 357207 |
End bp | 358064 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | methylisocitrate lyase |
Protein accession | ACX90679 |
Protein GI | 261601076 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0696555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTCAAG TATTAAGGGA AGCTGATTTC TTAATGGTTC CGGGAGTTTT TAATCCTTTT ACTGCAATTC TGGCAAAAAA GGTAGGTTTT AAGGCTGTAT ACTTATCAGG TGCTGCTCTT ACATCATCTT ACGGCTTACC AGACATAGGT TTAATAACAT TAGATGAAGT TGCTGAGATG ATAAGAAGAA TTAAAGAAGT TGTTGATATC CCGATAATAG TTGATTCAGA TACCGGGTTT GGTGAGGCAA TGAACGTTTA TAGAACTGTA AGAGTCCTAG AAAAAGCAGG TGCTGATGCT ATTCAAATAG AGGATCAAAG AATGCCAAAG AAATGTGGGC ACTTAGAGGG TAAAGAGGTC GTGGAGCCTT TAGAAATGGT TCAAAAGATA AAGGCTGCTT TAAAGGCTAG AAGAGATGCT TTAATAATAG CAAGAGTAGA TTCTCGTGGT GTAATTGGTC TTGACGATGC AATAGAGAGG GCTAAGATTT ATTTAGAGGC AGGAGCTGAT ATAATATTTC CAGAGGCTTT AACCAGTAAG GAGGAATTCA CTAAGTTCGC TAAAGAGGTA AAAGCCCCGT TATTAGCTAA TATGACTGAA TTTGGTAAAA CCCCTTACAT TAAAGCTCAA GAGTTTAAGG AGATGGGTTA CAAATATGTA ATATTCCCTG TTACTATATT TAGGGTAGCA GCTAAGGCGA TGAAGGATGC CTTAGAGGTT TTATTAAGAG AGGGAACACA AATCAACTTA TTAGATAAAA TGATTAATAG GCAACAGCAA TATGAGATAA TTGATTACTT CTTCTACGAG AGATTAGACA AGGAATTAGG TAGTATAAAA CTCGTTAGAA AGCTTTAA
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Protein sequence | MSQVLREADF LMVPGVFNPF TAILAKKVGF KAVYLSGAAL TSSYGLPDIG LITLDEVAEM IRRIKEVVDI PIIVDSDTGF GEAMNVYRTV RVLEKAGADA IQIEDQRMPK KCGHLEGKEV VEPLEMVQKI KAALKARRDA LIIARVDSRG VIGLDDAIER AKIYLEAGAD IIFPEALTSK EEFTKFAKEV KAPLLANMTE FGKTPYIKAQ EFKEMGYKYV IFPVTIFRVA AKAMKDALEV LLREGTQINL LDKMINRQQQ YEIIDYFFYE RLDKELGSIK LVRKL
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