Gene Ssol_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0396 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp357207 
End bp358064 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content36% 
IMG OID 
Productmethylisocitrate lyase 
Protein accessionACX90679 
Protein GI261601076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0696555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTCAAG TATTAAGGGA AGCTGATTTC TTAATGGTTC CGGGAGTTTT TAATCCTTTT 
ACTGCAATTC TGGCAAAAAA GGTAGGTTTT AAGGCTGTAT ACTTATCAGG TGCTGCTCTT
ACATCATCTT ACGGCTTACC AGACATAGGT TTAATAACAT TAGATGAAGT TGCTGAGATG
ATAAGAAGAA TTAAAGAAGT TGTTGATATC CCGATAATAG TTGATTCAGA TACCGGGTTT
GGTGAGGCAA TGAACGTTTA TAGAACTGTA AGAGTCCTAG AAAAAGCAGG TGCTGATGCT
ATTCAAATAG AGGATCAAAG AATGCCAAAG AAATGTGGGC ACTTAGAGGG TAAAGAGGTC
GTGGAGCCTT TAGAAATGGT TCAAAAGATA AAGGCTGCTT TAAAGGCTAG AAGAGATGCT
TTAATAATAG CAAGAGTAGA TTCTCGTGGT GTAATTGGTC TTGACGATGC AATAGAGAGG
GCTAAGATTT ATTTAGAGGC AGGAGCTGAT ATAATATTTC CAGAGGCTTT AACCAGTAAG
GAGGAATTCA CTAAGTTCGC TAAAGAGGTA AAAGCCCCGT TATTAGCTAA TATGACTGAA
TTTGGTAAAA CCCCTTACAT TAAAGCTCAA GAGTTTAAGG AGATGGGTTA CAAATATGTA
ATATTCCCTG TTACTATATT TAGGGTAGCA GCTAAGGCGA TGAAGGATGC CTTAGAGGTT
TTATTAAGAG AGGGAACACA AATCAACTTA TTAGATAAAA TGATTAATAG GCAACAGCAA
TATGAGATAA TTGATTACTT CTTCTACGAG AGATTAGACA AGGAATTAGG TAGTATAAAA
CTCGTTAGAA AGCTTTAA
 
Protein sequence
MSQVLREADF LMVPGVFNPF TAILAKKVGF KAVYLSGAAL TSSYGLPDIG LITLDEVAEM 
IRRIKEVVDI PIIVDSDTGF GEAMNVYRTV RVLEKAGADA IQIEDQRMPK KCGHLEGKEV
VEPLEMVQKI KAALKARRDA LIIARVDSRG VIGLDDAIER AKIYLEAGAD IIFPEALTSK
EEFTKFAKEV KAPLLANMTE FGKTPYIKAQ EFKEMGYKYV IFPVTIFRVA AKAMKDALEV
LLREGTQINL LDKMINRQQQ YEIIDYFFYE RLDKELGSIK LVRKL