| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_0005 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | + |
|---|
| Start bp | 3724 |
|---|
| End bp | 4569 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | Conserved TM helix repeat-containing protein |
|---|
| Protein accession | ACX90311 |
|---|
| Protein GI | 261600708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.152576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAC AGAGGATATC CGTGATAATA GTATCAGCTC AAACATCGAT TTCGCAAGCC
TTATCTGGGA TAGCTACTAG TATTATTGAT GCAATACCTT CTATAATACT ATTTGTAATA
ATACTATTAG TAGGTTATAT AATAGGTAAT ATCGTAGCGT ATTCCATAAG GACATTTTTA
GGTAGGATTT TTAGAGAGGA ACACGTTAGA GCAAGTGTTG ATATAATAGC AGGTACAGTG
AAGGCGTTAA TCATCCTAAT CGCATTGTCA ATTGCTCTTT CTTTTTTACA GCTAGGAGCA
GCTTCTGGAT ATATTCAACA GATAGCTAAT TATTTGCCCA AATTAGCTGG AGCAATAGTT
CTTCTTACCA TTGGCTTAAC TCTAGTTAAT ATTTTAGTTG ATTACATGCA GAGGCAAATA
GGAGCTAGAT CGCAAGATGA CTTAATAACT GCGATATTCA ATGTCTTAAG GTTCGGTTTA
TATGCAGCCA TCATAACTGT TGCTGCGGCC TTAGCGATTT TTAGTGTTAT ACCATATGTG
GATCCTTATG TATTTTATGC TGTAATATTA GGTGCGGTAA TACTATATGC TGCCTATGCT
TTAATTGATA AGGTGTTAGT TCCCTTTGCT AACTCTAATC CAGATCTAGC CTACGTAGCA
AATTATGGTA GATTTATACT ATATATAATT GTACTATTGA TCGCAATTGC CATAATAGTT
GAACCCTTTG GAAACGTTAC ATCAATAATA TATGCTTTAT CATGGGGTCT AGCGATAGCT
TTTGCCATAG CGTTAATTCC TCTTGTTATA GCTTTAGTAA AGAAATTCTT AGCAGAAATT
AAGTGA
|
|---|
| Protein sequence | MNIQRISVII VSAQTSISQA LSGIATSIID AIPSIILFVI ILLVGYIIGN IVAYSIRTFL
GRIFREEHVR ASVDIIAGTV KALIILIALS IALSFLQLGA ASGYIQQIAN YLPKLAGAIV
LLTIGLTLVN ILVDYMQRQI GARSQDDLIT AIFNVLRFGL YAAIITVAAA LAIFSVIPYV
DPYVFYAVIL GAVILYAAYA LIDKVLVPFA NSNPDLAYVA NYGRFILYII VLLIAIAIIV
EPFGNVTSII YALSWGLAIA FAIALIPLVI ALVKKFLAEI K
|
|---|
| |