Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_R0010 |
Symbol | |
ID | 5614108 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 491508 |
End bp | 493042 |
Gene Length | 1535 bp |
Protein Length | |
Translation table | |
GC content | 54% |
IMG OID | 640931251 |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0022303 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000320852 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | AGAGTTTGAT CATGGCTCAG ATTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC GGAAACGGAG ATAGCTTGCT ATCAGACGTC GAGCGGCGGA CGGGTGAGTA ATGCCTAGAT ATCTGCCTAG TCGTGGGGGA TAACAGTTGG AAACGACTGC TAATACCGCA TACGCCCTAC GGGGGAAAGG AGGGGACCTT CGGGCCTTTC GCGATTAGAT GAGTCTAGGT GGGATTAGCT AGTAGGTGAG GTAATGGCTC ACCTAGGCGA CGATCCCTAG CTGTTCTGAG AGGATGATCA GCCACACTGG GACTGAGACA CGGCCCAGAC TCCTACGGGA GGCAGCAGTG GGGAATATTG CACAATGGGC GAAAGCCTGA TGCAGCCATG CCGCGTGTGT GAAGAAGGCC TTCGGGTTGT AAAGCACTTT CAGCGAGGAG GAAAGGTAGG TAGTTAATAA CTGCTTGCTG TGACGTTACT CGCAGAAGAA GCACCGGCTA ACTTCGTGCC AGCAGCCGCG GTAATACGAG GGGTGCAAGC GTTAATCGGA ATTACTGGGC GTAAAGCGTA CGCAGGCGGT TTGTTAAGCC AGATGTGAAA GCCCCGGGCT CAACCTGGGA ATTGCATTTG GAACTGGCAA ACTAGAGTCT TGTAGAGGGG GGTAGAATTT CAGGTGTAGC GGTGAAATGC GTAGAGATCT GAAGGAATAC CGGTGGCGAA GGCGGCCCCC TGGACAAAGA CTGACGCTCA TGTACGAAAG CGTGGGGAGC AAACAGGATT AGATACCCTG GTAGTCCACG CCGTAAACGA TGTCTACTCG GAGTTTGGTA ACTTAGTTAC TGGGCTCCCA AGCTAACGCA TTAAGTAGAC CGCCTGGGGA GTACGGCCGC AAGGTTAAAA CTCAAATGAA TTGACGGGGG CCCGCACAAG CGGTGGAGCA TGTGGTTTAA TTCGATGCAA CGCGAAGAAC CTTACCTACT CTTGACATCC AGAGAATTCG CTAGAGATAG CTTAGTGCCT TCGGGAGCTC TGAGACAGGT GCTGCATGGC TGTCGTCAGC TCGTGTTGTG AAATGTTGGG TTAAGTCCCG CAACGAGCGC AACCCTTATC CTTATTTGCC AGCACGTAAT GGTGGGAACT TTAGGGAGAC TGCCGGTGAT AAACCGGAGG AAGGTGGGGA CGACGTCAAG TCATCATGGC CCTTACGAGT AGGGCTACAC ACGTGCTACA ATGGTCGGTA CAGAGGGTCG CAAAGCCGCG AGGTGGAGCT AATCCCACAA AGCCGGTCGT AGTCCGGATC GGAGTCTGCA ACTCGACTCC GTGAAGTCGG AATCGCTAGT AATCGTAGAT CAGAATGCTA CGGTGAATAC GTTCCCGGGC CTTGTACACA CCGCCCGTCA CACCATGGGA GTGGGCTGCA CCAGAAGTAG ATAGCTTAAC CTTTCGGGGA GGGCGTTTAC CACGGTGTGG TTCATGACTG GGGTGAAGTC GTAACAAGGT AGCCCTAGGG GAACCTGGGG CTGGATCACC TCCTT
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Protein sequence | |
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