| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4492 |
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| Symbol | |
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| ID | 5612568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5495623 |
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| End bp | 5496417 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640935469 |
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| Product | F0F1 ATP synthase subunit A |
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| Protein accession | YP_001476222 |
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| Protein GI | 157377622 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000647119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000648141 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGCAA CTGGTGAAGC GTTAACACCG CAGGGCTATA TCCAGCACCA CCTTACCAAC
TTAAGTGTTG GTGAAGGCTT CTGGACATGG CATATTGATT CGTTGCTCTT TTCGGTTGGG
CTTGGTGTTC TGTTCTTATG GCTATTCCGT AGCGTTGGAA AGAAGGCAAC TACAGGTGTT
CCCGGCAAAC TTCAGTGTTT TGTCGAGATG ATCATTGAGT TTGTCGACTC TAGCGTGAAA
GAAACCTTCC ATGGCCGCAA TCCTGTTATT GCTCCGTTGG CATTAACTAT TTTTGTTTGG
GTATTCATGA TGAACTTCAT GGATATGGTT CCAGTTGACT GGATCCCATC ACTGGCAGCT
GCTGCTGGTA TCCCTTACAT GAAAGTTGTA CCAACGACAG ACTTAAACAT TACCTTTAGC
ATGGCTATTG GTGTGTTCTT GCTGATTATT TACTACAGCA TTAAAGTCAA AGGCATCTCA
GGCTTTGTTA AAGAGCTGAC TATGCAGCCT TTTAACCATT GGGCAATGAT ACCCGTCAAC
TTCTTGTTAG AAACCGTAAC TCTGATTGCT AAGCCAATTT CATTGGCATT GCGTCTGTTC
GGTAACTTGT ATGCAGGTGA GTTGATCTTC ATTCTTATTG CGTTGATGTA TGGTGCTAAC
ATGGCGTTAT CTGCCCTAGG TGTAACATTA CAACTAGGTT GGTTAATTTT CCATATTTTG
GTTATTACTC TACAAGCGTT TATTTTCATG ATGCTGACAA TTGTTTACTT AAGCATGGCG
CATGAAGATC ATTAA
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| Protein sequence | MAATGEALTP QGYIQHHLTN LSVGEGFWTW HIDSLLFSVG LGVLFLWLFR SVGKKATTGV
PGKLQCFVEM IIEFVDSSVK ETFHGRNPVI APLALTIFVW VFMMNFMDMV PVDWIPSLAA
AAGIPYMKVV PTTDLNITFS MAIGVFLLII YYSIKVKGIS GFVKELTMQP FNHWAMIPVN
FLLETVTLIA KPISLALRLF GNLYAGELIF ILIALMYGAN MALSALGVTL QLGWLIFHIL
VITLQAFIFM MLTIVYLSMA HEDH
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