Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4475 |
Symbol | |
ID | 5612865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5464196 |
End bp | 5464447 |
Gene Length | 252 bp |
Protein Length | 83 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640935445 |
Product | hypothetical protein |
Protein accession | YP_001476205 |
Protein GI | 157377605 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000150782 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000228641 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGATTGTC GTCTTGGCTG TGGAGCGTGT TGTATCGCCC CCTCAATAAC TAGCCCTATT CCAGGTATGC CTGAAGGAAA GGCCGCTGGT GAACGTTGTG TTCAGTTATC CGAAGACAAT CTGTGCAAAA TCTTTGGCAG CAAGGAACGT CCGGATGTAT GTAGCTCTTT TTCTGCTACT TTTGACGTCT GTGGTAATAG CAACAATGAA GCGCTTAGGC TGATTGCTTT TTTAGAGTCA CAAACCAGCT AA
|
Protein sequence | MDCRLGCGAC CIAPSITSPI PGMPEGKAAG ERCVQLSEDN LCKIFGSKER PDVCSSFSAT FDVCGNSNNE ALRLIAFLES QTS
|
| |