| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4466 |
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| Symbol | |
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| ID | 5613004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5455081 |
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| End bp | 5456265 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935436 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476196 |
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| Protein GI | 157377596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.119173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACATC ATGATGTCAT CATTATCGGT GCGGGGGCTG CGGGTCTTAT GTGCGCAGCA
ACGGCGGGCT ATCGTGGCCG TGATGTATTA GTTCTCGACA ATGCTAAACA GGCTGGACGT
AAGATACTGA TCAGTGGTGG GGGGCGTTGT AACTTCACCA ACCAAAAAGT TGAACCGAAT
AATTTTATCT GTAGTAACGC TCACTTCGTC AAATCTGCCC TGGCCAGATA TCGAAGCAGT
GACTTTATAG AGCTCGTCGA GCGCCATGGT ATCGAATACC ACGAACGGGA TCATGGTCAG
CTGTTCTGTA ATGACTCGGC TAAAGAGATA GTGACCATGC TCCTGACTGA ATGCGAGTGG
GCGGGAGTTC AGATCAAATT ACGCACCGTA ATTAATGAGA TTGGTCAAAA TGAACAGGGG
CAGTTCGAGC TGATCACAGA CAAAGAGCAC TACACATGTG ACTCTCTCGT CATGGCTACC
GGTGGACTCT CAATGCCGAA GCTCGGGGCA AGTCCATATG GCTATCATAT TGCTCAGCAG
TTTGGCTTAA AGCTGCTACC TACTCATGCA GGCTTGGTGC CTTTTACCTG GCATAGTGAA
CAAAAACAGA AGTTCGAACC CCTGTCCGGT ATCGCCGTTC CCAGTACTAT CACAGCTAAA
GATGGCACTC AGTTTAGTGA GGCGCTGCTG TTCACCCACA GAGGCTTATC CGGCCCGGCT
ATTTTGCAGA TCTCCAACTT CTGGAAGGCG GGGGAAACGA TTAGTATCAA CTTGCTGCCG
GGTGTCGATG CCAGAGCCGC AATAGAGCTG GTGTTAGCCA ACCATCCTAA ACAGAGTCTG
CGTAACACAT TAAGCCATTG GTTACCTAAG CGTCTGGTTG AAGCCCTGTT TGATGAAACG
CTGCTCAACA AGGCGATGAA TCAGTTGATC CACAGTGAAG TCGACCAGCT TGCTGTCGAG
CTTGAGTCTT GGGAAGTTCT CATGAACGGT ACGGAAGGTT ACCGGACCGC CGAAGTAACA
CTTGGCGGCG TGGATACCGA CGAGCTGTCG TCGAAAACCA TGGAAGCTAA ATCCGTATCC
GGCCTCTACT TTATCGGTGA GGTCATGGAC GTTAGCGGTT GGCTGGGCGG TTTCAACTTC
CAGTGGGCCT GGTCATCGGG CGTTGCAGCC GGACAAGCGG TTTAA
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| Protein sequence | MKHHDVIIIG AGAAGLMCAA TAGYRGRDVL VLDNAKQAGR KILISGGGRC NFTNQKVEPN
NFICSNAHFV KSALARYRSS DFIELVERHG IEYHERDHGQ LFCNDSAKEI VTMLLTECEW
AGVQIKLRTV INEIGQNEQG QFELITDKEH YTCDSLVMAT GGLSMPKLGA SPYGYHIAQQ
FGLKLLPTHA GLVPFTWHSE QKQKFEPLSG IAVPSTITAK DGTQFSEALL FTHRGLSGPA
ILQISNFWKA GETISINLLP GVDARAAIEL VLANHPKQSL RNTLSHWLPK RLVEALFDET
LLNKAMNQLI HSEVDQLAVE LESWEVLMNG TEGYRTAEVT LGGVDTDELS SKTMEAKSVS
GLYFIGEVMD VSGWLGGFNF QWAWSSGVAA GQAV
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