| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4389 |
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| Symbol | |
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| ID | 5611348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5371787 |
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| End bp | 5371951 |
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| Gene Length | 165 bp |
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| Protein Length | 54 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935359 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476119 |
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| Protein GI | 157377519 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0401] Uncharacterized homolog of Blt101 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000571774 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGACACCA ATAAGCTTTT ACTCATTATT ATCGCTATCT TGCTACCCCC CGTAGCCGTA
TTCCTGAAAT CGGGTGTAGG TAAAGACCTG TTGATTAACA TCATCCTATG CTTGCTCTTC
TTTATTCCTG GTCTGCTGCA TGCGCTCTGG GTTGTGACTA AGTAA
|
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| Protein sequence | MDTNKLLLII IAILLPPVAV FLKSGVGKDL LINIILCLLF FIPGLLHALW VVTK
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