| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4384 |
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| Symbol | |
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| ID | 5610818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5367644 |
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| End bp | 5368546 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935354 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476114 |
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| Protein GI | 157377514 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0181481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGG GGAGTCTGAA CGGTGCGGGA ATTGGCCTGC GCATCCCCCA TGTGCAGCAG
ATCTTAGCTG CCGATGAATC CGATATTCCA TGGTTTGAGG TGTTGGCGGA TAACTGGTTA
GTTGAAGGAG GGCTGAATAA GCAGATGCTC GAGGCCATTG CCGAACGTTA TCCTCTGGTG
CTCCACAGCG TAGGCCTTTC CTTAGGTGGT TTGCCTGCCA TAGACCTGGA CTATCTGGCA
CAAATCAGAG CGTTAAAGGA ATCAACGGGC GCCCTCTGGT ATTCGGAGCA TGCGAGCTTC
TCTGGTAATG CCGGACGTAA GGTCCCCGAT CTCTTGCCCT TACCCTACAC CGAAGAGGCG
GTGAAACACC TGAGCCGACG TATTATTCAG GTGCAGGAGT TTATGGGTGA AAGAATTCTG
CTTGAAAACG TGTCTACCTA TGTAAGCTGT CAATTTAATG AGCTGACCGA AGGAGAGTTT
CTTGCTGCTG TGGCGAAAGA AGCCGATTGC TATCTGCTGT TAGATATCAA TAACGCCTAT
GTCACGGCTA AGAATCTCAA TCAGGATATG CAGGCGTTTA TGGAAGCTAT TCCGGTGGAG
CGGGTGAAGC AGATCCACCT CGCGGGTTTC CATGACAAGG GAGACTTTCT GCTCGATGCC
CATAACCATC CGGTAGACAA AGATGTATGG CAGGAATTCG AGCATTTTAT TGCCAAAAAT
GGAGCCATAC CCAGCATGAT CGAGTGGGAT AACGACTTAC CACCACTGGA GAGGTTGCTC
GCCGAACGAA ATATCGCAGC GGCGATATTA CAGGCCGCCG ATGAAAATCG GCACCCGAAT
GGTAGTCGAA CCGATTCTCG CGGGAAAGCT GAGGGAGACA GAGGGGTAGG ACAATGCGCT
TAG
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| Protein sequence | MKRGSLNGAG IGLRIPHVQQ ILAADESDIP WFEVLADNWL VEGGLNKQML EAIAERYPLV
LHSVGLSLGG LPAIDLDYLA QIRALKESTG ALWYSEHASF SGNAGRKVPD LLPLPYTEEA
VKHLSRRIIQ VQEFMGERIL LENVSTYVSC QFNELTEGEF LAAVAKEADC YLLLDINNAY
VTAKNLNQDM QAFMEAIPVE RVKQIHLAGF HDKGDFLLDA HNHPVDKDVW QEFEHFIAKN
GAIPSMIEWD NDLPPLERLL AERNIAAAIL QAADENRHPN GSRTDSRGKA EGDRGVGQCA
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