| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4380 |
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| Symbol | |
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| ID | 5613500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5364684 |
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| End bp | 5365682 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935350 |
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| Product | aminoglycoside phosphotransferase |
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| Protein accession | YP_001476110 |
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| Protein GI | 157377510 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.113804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTGA CAAGATTACC CCTCAACCCT AGTTATGATG AGGCTTGTGA TATTTGCGAT
CACTGGCAAC TCAATGATTG GCAACCTCTG CTCGATATCA TCATCGACCG GCACAACATA
ACTGTCTCCC AAGTGTCTCA GAACTTCGAA GGCACTAATC CTGTGTTTGA GCTGACATTG
AACTCTGAGC AAAGTGAAGA GCAAGCTTAT ATCGTTAAGG TTCTCGCGCC AAACTGGCAC
AGCCAGTTTC AGAGCGAATA TCACAGCCTC AAATTACTCA ATGGTCAAGA TTTAGGAATC
GCCGTACCTA AATTGCTCTA CTCGGGAGAG GTCGATAACT GGTACTACTT AATCATTGAG
AAACTCGAAG GAGTAATGCT GTCATCGGTA ATGGCCACAC TAGCCTTAGA GAATAAACTG
GAGATAGCCC ATGCTCTCGG TCAGTTCAGT GCCCGACTAC ACCGACTCGA TGTAGCCGGG
ATCCCAGAGA TAAAACTGGA TTGGCCGGAA TTTGTTCGGT TACAGAGAAA GCATTGCTAT
GCGAAACGCA AGAAACAACA AGTTCCCACC GCCTTGCTTG AGCGTTTAAC CTCCTATCTG
GAACAGCATA TCTCCAGGCT AGATACTTTT TTGAAGAGCG AGGAGATGCA CCTGATCCAT
ACCGATCTAC ATCCGGGTAA CCTGCTGGTA GCGGCCCGAG GGGGCCATTA CCGACTCGTA
GGAATTTTTG ATTTTGGTGA CGCCCTCGTC TGCCCCGATC CACTGTTTGA GTTTGCCTCT
CCTGCCCTAC TGTTTGCACA GGGAGAGCCC GGAATATTTA ATGCCTTTCT TGACGGCTAT
GGTTACCGGG AAGAGCGGAA TAACGGCTTG CAACAACATA TGATGGTATT GAGCCAGTTA
AGACACACAG GCGATCTCAA TTATCTGCTC CATCATGTTC CCCATTGCGC CGATGAAACC
CGTTGGCAAG CCCTGGAATC AAAATTTTTC CCGCTATGA
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| Protein sequence | MPLTRLPLNP SYDEACDICD HWQLNDWQPL LDIIIDRHNI TVSQVSQNFE GTNPVFELTL
NSEQSEEQAY IVKVLAPNWH SQFQSEYHSL KLLNGQDLGI AVPKLLYSGE VDNWYYLIIE
KLEGVMLSSV MATLALENKL EIAHALGQFS ARLHRLDVAG IPEIKLDWPE FVRLQRKHCY
AKRKKQQVPT ALLERLTSYL EQHISRLDTF LKSEEMHLIH TDLHPGNLLV AARGGHYRLV
GIFDFGDALV CPDPLFEFAS PALLFAQGEP GIFNAFLDGY GYREERNNGL QQHMMVLSQL
RHTGDLNYLL HHVPHCADET RWQALESKFF PL
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