| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4303 |
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| Symbol | rpsH |
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| ID | 5611506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5277752 |
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| End bp | 5278144 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935266 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001476035 |
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| Protein GI | 157377435 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000012409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000562401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCTAT AGCGGATATG TTAACACGTA TTCGTAATGG CCAAGCTGCT
AACAAAGTAT CAGTATCTAT GCCTTCTGCT AAGCTAAAAG TCGCTATTGC GAAAACGCTT
AAAGAAGAAG GTTATATCAC TGACTACGCC GTAGCAGATG AAACCAAACC TGTTCTTGAA
ATTACGTTAA AGTATTTCCA AGGCCAGCCA GTTGTTGAGA CTATCCAACG CGTTAGCCGT
CCTGGACTTC GTATTTACAA AAGTAAAGAC GAACTTCCAA AGGTTATGGG CGGACTGGGT
GTCGCAATTG TGTCCACTTC TAAAGGTTTG ATGACTGATC GCACTGCCCG CCAAAATGGC
ATGGGCGGGG AAGTTATCTG CTACGTAGCA TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNGQAA NKVSVSMPSA KLKVAIAKTL KEEGYITDYA VADETKPVLE
ITLKYFQGQP VVETIQRVSR PGLRIYKSKD ELPKVMGGLG VAIVSTSKGL MTDRTARQNG
MGGEVICYVA
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