Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4212 |
Symbol | |
ID | 5611859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5175756 |
End bp | 5176301 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640935171 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001475944 |
Protein GI | 157377344 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAATTA ATCAAAAAGT GGGCTTTGTC TTCAGACAAG AGAACTGTGT TGGTTGTGGT GCCTGTACCG TTGCCTGTCA AATTCACAAC GAGCTGCCTG AAAACCACCG ATTCCGCAAA GTCGATCGCT ATGAAGTAGA ACGCGAAGAT GGCGCGATCG ATGTGTGGCT ATCTCACTCT TGCATGCACT GTGAAAACCC TGCCTGCTTG ATGGTCTGCC CGGCAAAAGC CTACCACGTC AGAGATGACG GTATCGTGGT ACTGGATCGT GAGAAATGTA CCGGTTGTGG CCTGTGTGCC ACCGCCTGTC CATACTCTGC CGTCAGCATC CGCGAAGACG ATGGCAAGGC CGACAAGTGC AACATGTGTG TTGAACTTCT GGACCGTGGC ATGAAGCCTG CGTGTGTAAC GGGTTGCCCT GTGCAATGTA TTGAAACCGG AAACATCGAT GAGGTGTTGA AGAAGCCTTC AGCGAGTAAA GAAGGTGTCG GTTACGGCGA TTGCATCACG AAACCTAACA TGGTGATTAT TAAGGAACGC GCATAA
|
Protein sequence | MSINQKVGFV FRQENCVGCG ACTVACQIHN ELPENHRFRK VDRYEVERED GAIDVWLSHS CMHCENPACL MVCPAKAYHV RDDGIVVLDR EKCTGCGLCA TACPYSAVSI REDDGKADKC NMCVELLDRG MKPACVTGCP VQCIETGNID EVLKKPSASK EGVGYGDCIT KPNMVIIKER A
|
| |