| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4204 |
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| Symbol | |
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| ID | 5611881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5161997 |
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| End bp | 5164063 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935163 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001475936 |
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| Protein GI | 157377336 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGGG CAAATAAACT CACCGTGTTG GCCATGATTT CGGCCGGACT TTTTTTAGGT
GGCTCGGCAA ACGCGTTAGC CTCGCAGCGA ACTCATCAAA TCACCACCGA TGATTTTTTC
GATATTGGGG GGATGAGTAG CGTACAGTTA AGCCCCGACG GAAAACAGGC CGTCTGGCTC
GAGACGCGTT GGGATAAAGA GCTGGATAAA TCCCAGCGAG ACCTATGGCA GGTTAACACC
AAAAACAAAA AAACCACTCG CCTAACCTTC ACCAACGAGA GTGAGTCCAG CCCACAGTGG
AGCGGCGATG GTCAGTATAT CTACTATATT GGCAAGGTGA CCCATGAAGA CAAGAAAGCC
CCTTACAATG GTAAGAGCCA GGTCTTTCGT ATCAACCGAG ATGGCGGCGA TGCCGTGCCC
GTGACCAAAG AGGTTGAGGG GGTCAGTTCA TTTTCACTCA GTCCCGATGG TAATACCCTC
TATTTCTTAG GCAGCAAGAC GGTCAAAGAT AAAGATGAGT GGGCGTCTAT GCGTGCAGGC
CACAGCGCGC CTAAATACGC CCATGGCGAA AGAAAAACCA ACCCACTGTA TAAGCTAGAT
CTCCAGCATT TCAAACAGCA ACTCATTCTG GATGATGACA AAGTCGTATG GAATTTCAGT
GTCAGCGATG ATGGCAGTAA AGTTGCCCGA ATCACGACAT CAGATAACGA GCTGGTCAAC
CTCGAGGGTT GGTCTGATAT CGAAATTTAT AATACCCGGA GCAAGAGCAA CGAGGTTCTG
GAAGATACGG CATGGCGCGA ACAGGCTCCA TCGCCCTATG GCTGGCTACT CGGACTCGAT
TGGCACTCAG ATAACCAACA GCTCGCCTTT CGTATCGACT TCGATGGCCA TCCGGGCAAG
CTGTTCGTCT CCAATACTAA GACCAAGTCA CTGACCGAAG TGACGCGTAT CGATGATGTG
ACGCTAAACT CGTCAGATAT TCACTGGCGC CCAAACAGTG ATGAGCTCTG CTACCGCGGC
GCCGATCACG CCAGGGTGAA ACTCTTCTGT ACTGAGGTCG AAGACGGCAA ACAGGGAGAT
ACCAGAGCAG TCGTGAATGG CGATCTGGTG ATCGGTAGCT ACAGCTTCAG CCACAATGGC
AAGAAGTTGG CATTTAGCCA TAATGGGCTG GACCACTTCT CAGAGATGTT CATTGCCGAT
GCCAATAGCA AGCGCGCCAA GTTTAAGCGC ATCACCAATA TCAATCCTCA GGTCGATAGC
TGGATACTAC CGCAAATATC CGTCGTAAAA TGGAAGGCCC CCGATGGCAG CACAGTCGAA
GGTATCTTAG ATCTTCCGGC GGGATATAAG AAAGAGGATG GCCCACTGCC ATTAATCGTG
CAGATCCATG GCGGTCCTAC CTCCGCTACA CCTTATGCCC TGCAACACAG ATCCTACGGC
CGCTCTACAT TTACAGCAAA TGGCTGGGCT CTGCTGTCAC CCAACTATCG TGGCTCGACC
GGTTATGGCG ATAAGTTCCT CACCGAACTC GTGGGTCAGG AACATGTCAT CGAGGTCAAT
GACATCATGG CCGGTGTCGA CCATCTGATC GACGAAGGTA TTGTCGATGG CGATAAGATG
GCCGTCATGG GATGGAGCAA CGGCGGCTAT CTCACTAATG CTTTGATCAG TACCAATGAG
CGCTTCAAGG CGGCAAGTTC CGGCGCCGGA GTGTTCGATC AACGCCTGCA GTGGATGCTG
GAAGATACAC CTGGCCACGT GGTCAACTTC ATGGAAGGTC TCCCCTGGGA GAAGCCAGAT
GCTTACACTC ATGGCTCTTC ACTCACCCAC GCAGATAAGA TTAAAACACC AACGCTTATC
CATATAGGTG AGAATGATCA ACGCGTTCCA GTCGGACATG CTCAGGGTCT ATATCGTGCA
CTCAAACATT ACCTCAATGT ACCGGTAGAG TTGATCGTTT ATCCGGGCGA AGGTCATGGA
CTGAGTAAGT ACCAACACAG AAAAGCTAAG ATGGAGTGGG ACCAGAAATG GTTCAACCAC
TACGTCCTCG GCAAAGCTAT CGATTAA
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| Protein sequence | MGRANKLTVL AMISAGLFLG GSANALASQR THQITTDDFF DIGGMSSVQL SPDGKQAVWL
ETRWDKELDK SQRDLWQVNT KNKKTTRLTF TNESESSPQW SGDGQYIYYI GKVTHEDKKA
PYNGKSQVFR INRDGGDAVP VTKEVEGVSS FSLSPDGNTL YFLGSKTVKD KDEWASMRAG
HSAPKYAHGE RKTNPLYKLD LQHFKQQLIL DDDKVVWNFS VSDDGSKVAR ITTSDNELVN
LEGWSDIEIY NTRSKSNEVL EDTAWREQAP SPYGWLLGLD WHSDNQQLAF RIDFDGHPGK
LFVSNTKTKS LTEVTRIDDV TLNSSDIHWR PNSDELCYRG ADHARVKLFC TEVEDGKQGD
TRAVVNGDLV IGSYSFSHNG KKLAFSHNGL DHFSEMFIAD ANSKRAKFKR ITNINPQVDS
WILPQISVVK WKAPDGSTVE GILDLPAGYK KEDGPLPLIV QIHGGPTSAT PYALQHRSYG
RSTFTANGWA LLSPNYRGST GYGDKFLTEL VGQEHVIEVN DIMAGVDHLI DEGIVDGDKM
AVMGWSNGGY LTNALISTNE RFKAASSGAG VFDQRLQWML EDTPGHVVNF MEGLPWEKPD
AYTHGSSLTH ADKIKTPTLI HIGENDQRVP VGHAQGLYRA LKHYLNVPVE LIVYPGEGHG
LSKYQHRKAK MEWDQKWFNH YVLGKAID
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