Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4185 |
Symbol | |
ID | 5612166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5144725 |
End bp | 5145093 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640935144 |
Product | tetraheme cytochrome c, putative |
Protein accession | YP_001475917 |
Protein GI | 157377317 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.17754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAT TACTATTGGC TTTACTCGTA GGGCTATCCC TGTCAACGAG CGCATTTGCC GGCGATCTGG TGAAGATGAA AGGCAAGACT GAAGGACGAA CCAATCATGA GTTTATCTAT GAGGATGGCT GCCAGAGCTG CCACCAAGGT TCAGGAAAGA AGAATGCGAC TGATAGCGCC TGCGTCGAGT GTCATGGCGA CATCAACAGC ATAGAAATTG ACGAGAGTAA GTTGGCAATC GAAGAAGCCA ACCCGCATAA GTCATTCCAC TACAACCAGG GCGCCAGCTG CTTAGCTTGT CACGGCGAAC ACGAGAAGAA GGCACCGGTA TGCGCCGAGT GTCACCGTAC CTGGTTCGAT GTGATGTAA
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Protein sequence | MSKLLLALLV GLSLSTSAFA GDLVKMKGKT EGRTNHEFIY EDGCQSCHQG SGKKNATDSA CVECHGDINS IEIDESKLAI EEANPHKSFH YNQGASCLAC HGEHEKKAPV CAECHRTWFD VM
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