Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4151 |
Symbol | |
ID | 5612427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5104119 |
End bp | 5104379 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640935110 |
Product | hypothetical protein |
Protein accession | YP_001475883 |
Protein GI | 157377283 |
COG category | [S] Function unknown |
COG ID | [COG2960] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATC CAAAGAAAAT CGAAGAAGTT GCTAAGCAAC TGAGCGAAAA CCTGCCTAGC GGACTGAAGC AATTCGCTGG CGAGTTTGAA GAAAAAAGTA AGCAGATCCT TCAAAATCAA TTGATGAAGT TGGATGTTGT CTCTCACGAA GAGTTTGAAG TACAACAACA TGTACTGCTA AAGACACGTG AGAAACTTGA AGCCCTTCAG GCACAGGTAG AAGCACTGGA GAAGAGACTC AACGAGAGTG AGAGCGAATA A
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Protein sequence | MINPKKIEEV AKQLSENLPS GLKQFAGEFE EKSKQILQNQ LMKLDVVSHE EFEVQQHVLL KTREKLEALQ AQVEALEKRL NESESE
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