| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4125 |
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| Symbol | |
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| ID | 5613456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5043253 |
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| End bp | 5043831 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935080 |
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| Product | urease accessory protein UreJ |
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| Protein accession | YP_001475857 |
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| Protein GI | 157377257 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2370] Hydrogenase/urease accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.4167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCGTT TAGCTGTTTT AGTGTTTGTC ATCCTCTTTT CGTCATTGCC GGTACAGGCC
CATGAGCTCC ACTCCTCAGG TGGTTTTATC ACCGGATTTA ACCATCCCGT TCTGGGTTTC
GATCACCTGT TAGCCATGCT GTGCGTGGGA ATCTTAAGTA CCCAGCTCGG TGGCAAGGCT
ATCTGGACCG TCCCCACCGC ATTCGTCATA TTTATGCTTG TTGGCGGTAT TCTTGGATTG
CTTTCAATTC CGGTTCCGTT TGTAGAGATG GGTATTGCGG TTTCGGTCCT GTTGTTAGGA
GTAGCCTTAG CCATCGATAA GCGATTACCT CAACTACTTG TGATGGCATT TGTTGGTGTA
TTTGCCATAT TTCATGGTCA TGCCCATGGT GTCGAGATGC CACAGTTAGC TAATCCGATT
CTCTATGCAT TGGGGTTTAT CAGCGGCACT GCGACGATAC ATATTGTCGG GGTATTGTTA
GGTATGGGGA TGCAGCATGT GAGCAAGCAG TATAACTTGA TGCGGATGTC TGGAGGCGTA
ATCGCGCTAA TTGGTGGTTA TCTGCTGATA GGTAGTTAA
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| Protein sequence | MMRLAVLVFV ILFSSLPVQA HELHSSGGFI TGFNHPVLGF DHLLAMLCVG ILSTQLGGKA
IWTVPTAFVI FMLVGGILGL LSIPVPFVEM GIAVSVLLLG VALAIDKRLP QLLVMAFVGV
FAIFHGHAHG VEMPQLANPI LYALGFISGT ATIHIVGVLL GMGMQHVSKQ YNLMRMSGGV
IALIGGYLLI GS
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