| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4053 |
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| Symbol | |
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| ID | 5610039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4963598 |
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| End bp | 4965094 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935008 |
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| Product | anaerobic nitric oxide reductase flavorubredoxin |
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| Protein accession | YP_001475785 |
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| Protein GI | 157377185 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0426] Uncharacterized flavoproteins
[COG1773] Rubredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTC ATGTCAAGAA CAACATCCAG TGGGTCGGGC AACGTGATTG GGAGGTACGT
GATTTTCACG GCACTGAATA TAAAACTGAG AAAGGGACCA GTTATAACAG TTATCTGATC
CAAGAGGAGA AAACGGTTCT GATCGATACC GTCGATCATA AGTTCAGCCA TGAGTTTGTA
CAAAAACTAG AGATGGAGAT CGATCTGAAG CAGATCGATT ACATCGTCAT TAATCATGCC
GAAGAAGATC ATGCCGGTGC CTTGGCGGTA CTCTTGGCAA AAATCCCTGG CACACCCATC
TACTGCACCG AAAATGCCAT TGACTCTATC ACAGGGCATC ACCACCACCC CGAGTGGAAC
TTCCATATCG TAAAAACCGG CGATAGCTTA GATATTGGTA ACGGTAAGCA ACTGATCTTC
ATCGAGACGC CTATGTTGCA TTGGCCCGAT AGCATGATGA CCTATATGAC CGGCGATGCC
GTGCTATTCA GTAACGATGC CTTCGGTCAG CATTACTGTG ACGAGCGCCT GTTTAATGAT
GAGGTCGATC AGACTGAGTT GATGGATCAA TGTCTGCGCT ATTACGCCAA CATTCTCACC
CCCTTCAGCC CGTTGGTGAC CGCGAAGATC CATGAAGTAC TCAGCTTCAA CCTGCCCGTC
GATATGATTG CTACCGCCCA CGGTGTGGTA TGGCGCGAGG ATCCGACACA AATTATTCAT
AAATACTTAG AGTGGGCCGA CGAGTATCAG GAAGATCGTA TCACCATCTT CTACGATTCA
ATGTCTAATA ATACTCGCAT GATGGCGGAT GCCATCGCTC AAGGGATCCA TGATGTCGAT
CCTAAGGTTG CGGTGAAGAT CTTTAACGTC TCCCGTCACG ATAAGAATGA GATCTTGTCT
AACCTGTTCC GCTCCAAGGG CGTGCTTGTG GGCTCATCGA CCATGAATAA TGTCATGATG
CCGAAGGTTG CCGGCATGCT GGAGGAGATC ACCGGACTGC GCTTTAAGAA CAAGAAGGCC
GGCGCCTTCG GCAGTTTCGG TTGGAACGGT GGTGCGGTAG ACCGTATCCA TACACGTCTG
ACCGATGCCG GATTTGAGAC GCTGTTAGGG CTAAAGACAA AGTGGAGGCC GGATGGAAAG
GCGCTGCTGG AGTGTCGTGA GCACGGTAAA GAGGTGGCGC GTCAATGGGC GTTGCACCCG
CTGGAGAACA TCGAGTCTAA GCAGGCAAGC CCGGTCAACG AGCCCCTTTT GAATACAGCT
GAGGCATCAG AGCCTGCTGT GAATGCCCAA GTGTCATCAA CCTGTGTCGA GACGACCGCG
GGACAAAGCA TGTTGTGCAG CGTCTGTCAG TGGGTTTACG ACCCGGCGCT GGGTGAGCCT
AATCAAGATG TCGCCCCGGG AACCGAGTGG ACTGATGTGC CAGAGACCTT CCTCTGCCCG
GATTGCAGCT TAGGTAAGGG AGTGTTTGAC CCTATTGCCA AAGAGGCCGC AGCATGA
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| Protein sequence | MAIHVKNNIQ WVGQRDWEVR DFHGTEYKTE KGTSYNSYLI QEEKTVLIDT VDHKFSHEFV
QKLEMEIDLK QIDYIVINHA EEDHAGALAV LLAKIPGTPI YCTENAIDSI TGHHHHPEWN
FHIVKTGDSL DIGNGKQLIF IETPMLHWPD SMMTYMTGDA VLFSNDAFGQ HYCDERLFND
EVDQTELMDQ CLRYYANILT PFSPLVTAKI HEVLSFNLPV DMIATAHGVV WREDPTQIIH
KYLEWADEYQ EDRITIFYDS MSNNTRMMAD AIAQGIHDVD PKVAVKIFNV SRHDKNEILS
NLFRSKGVLV GSSTMNNVMM PKVAGMLEEI TGLRFKNKKA GAFGSFGWNG GAVDRIHTRL
TDAGFETLLG LKTKWRPDGK ALLECREHGK EVARQWALHP LENIESKQAS PVNEPLLNTA
EASEPAVNAQ VSSTCVETTA GQSMLCSVCQ WVYDPALGEP NQDVAPGTEW TDVPETFLCP
DCSLGKGVFD PIAKEAAA
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