| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4021 |
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| Symbol | |
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| ID | 5610827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4925581 |
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| End bp | 4926600 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934976 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_001475753 |
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| Protein GI | 157377153 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2017] Galactose mutarotase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000192131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGTACGTT TTCGTCCGCT GGATCCCTGG GATGATCCCC GTGGTGGTCA AATTGAACGT
GTCAGAATAG ATAATGGCAT CTTAGCCCTG GAAGTATTAA GCCTGGGCGG CATCATCCGC
TCTCTGTGGA CACCGGATAG GAATGGCGAA CGCGGCAACA TAGTTCTGGG TTGTGACTCG
GCCGAAGATT ATCTAACCCA AGATGCTCAT TTAGGCGCTG TTGCCGGGCG TTATGCAAAT
AGAATTGCTA ACGGGCAAAT GACATTCGAT GGTGAGCATT ATTACTTAGA TAAAAATCAA
GCGAATAACT GCCTGCATGG CGGCCGGGAA GGCTTCAATC GAAAGCAGTG GAACATAGGT
CAGCTTCCCG ATGGTGTTCG CTTGAGTCTG GTTAGCCCCG ATGGTGATAT GGGATTCCCC
GGCAACTGTA ACATTCAGGT CGATTACCGT CTGGTGGCGA ATAACCTCTA TGTAGAGATG
TTTGCCGCCA CAGACAGAGC CTGCCCGCTC AGCATGACTC AGCATAGCTA CTTTAACCTG
GAGGGGAGTC GCTCCGGCGG CAACGGCAAC CACCGTCTGC AAATCGATAG CACTGAATAT
TTAGAAACTA ACTCAACCGG GATCCCCAAC AGTATCATAG CGGGGGCTGA CAGTAACTTG
GACTTCAGGA AGTCTAAAAC CCTGGCGAGC AAGCTCAAAG ATACTGATGG ATTAGACCAC
TGTTATCTTA TGAGAAATAA CGATAAAGAG CTGCTTCGTT TCGGTAACCT TAGTGCCCCC
GAATCTGGTC GCTGCATGAC ACTCTATACC AATCAGCCGG GAGTTCAGGT CTACGGTGCC
AACTTTCTGG AGGGTAACCC GGGCCGTAAT GAGCAGAAAT TGAAGCGTCA TCAAGCGGTC
TGTATCGAAC CTCAACAACT CCCCGATGCG CCTAATCAAA CTGAGTTACT TGGCGATCCC
TGGATAAAAC CCGGTCAGAT TTATCATCAT ATCAGTCGCT ACCAATTCGA GACATTTTAA
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| Protein sequence | MVRFRPLDPW DDPRGGQIER VRIDNGILAL EVLSLGGIIR SLWTPDRNGE RGNIVLGCDS
AEDYLTQDAH LGAVAGRYAN RIANGQMTFD GEHYYLDKNQ ANNCLHGGRE GFNRKQWNIG
QLPDGVRLSL VSPDGDMGFP GNCNIQVDYR LVANNLYVEM FAATDRACPL SMTQHSYFNL
EGSRSGGNGN HRLQIDSTEY LETNSTGIPN SIIAGADSNL DFRKSKTLAS KLKDTDGLDH
CYLMRNNDKE LLRFGNLSAP ESGRCMTLYT NQPGVQVYGA NFLEGNPGRN EQKLKRHQAV
CIEPQQLPDA PNQTELLGDP WIKPGQIYHH ISRYQFETF
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