| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4007 |
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| Symbol | |
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| ID | 5610429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4905837 |
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| End bp | 4906652 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934962 |
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| Product | UBA/ThiF-type NAD/FAD binding protein |
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| Protein accession | YP_001475739 |
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| Protein GI | 157377139 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.751788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000536443 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGAAGAAT TGGTGCTTTC TGAAGCATAT ATAAATCGAT TTGCAGGTAT TGGCCGTTTA
TATGGTCAAA AGGCATTAGC TCAATTTGCG CAATCACATG TTGCCGTTGT CGGAATCGGC
GGTGTGGGAA CCTGGGTCGC CGAATCGTTG GCAAGAAGTG GGGTCGGTGA GATCACCTTG
ATCGATCTCG ATGATATCTG CGTGACCAAT ACCAACCGCC AAATTCATGC CCTGAAAGAG
ACGATCGGTG AGTCAAAGGT TGAGGTGATG GCTGAGCGTA TCTTGCAGAT CAACCCGGAG
TGTAAGGTCA ACCAGGTGGA GGACTTCATT ACTGTGGAAA ATCTGGGGGA GTACTTCATC
GGCAAGAAGC AGGACGGCAC GCTTGATTAT GTGGTCGACT GTATCGATGC CGTAAAACCC
AAGGCGGCAC TCATTGCCTG GTGTAAGAGG CAGAAGCTTC CCATAGTGAC AGTAGGTGGT
GCGGGCGGTC AGATCGACCC TACGCAGGTT CAGGTAGCGG ATTTAGCAAA AACATACCAA
GACCCGCTAT TGGCAAAAGT GCGAAACCTG CTTCGCCGGG AGCATAATTT TTCTAAGAAT
GTGCAACGAC GGTTCAGTAT TGAAGCCGTT TTCTCTACCG AGCAACTGGT TTATCCCCAA
GCAGATGGCA GCGTATGCAA TACCAAGGCG AATGCCGATG GCAGCATGCG TATGGACTGT
GCATCCGGCT TTGGTGCGGT GACTGTGGTT ACCGGTACAT TCGGATTTGT TGCCGCGAGC
CGGGTGCTGA CTAAGCTGGC AAGAAAAGTG CTCTAA
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| Protein sequence | MEELVLSEAY INRFAGIGRL YGQKALAQFA QSHVAVVGIG GVGTWVAESL ARSGVGEITL
IDLDDICVTN TNRQIHALKE TIGESKVEVM AERILQINPE CKVNQVEDFI TVENLGEYFI
GKKQDGTLDY VVDCIDAVKP KAALIAWCKR QKLPIVTVGG AGGQIDPTQV QVADLAKTYQ
DPLLAKVRNL LRREHNFSKN VQRRFSIEAV FSTEQLVYPQ ADGSVCNTKA NADGSMRMDC
ASGFGAVTVV TGTFGFVAAS RVLTKLARKV L
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