| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4000 |
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| Symbol | |
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| ID | 5611073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4897378 |
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| End bp | 4898016 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934954 |
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| Product | disulfide bond formation protein |
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| Protein accession | YP_001475732 |
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| Protein GI | 157377132 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1495] Disulfide bond formation protein DsbB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0837638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAATA AATTAAAACA GTGGTTCGCA GACTTAAAAG CTTACCCACT ACTCACATTA
GAAGCCACAC AAGAAGGCCG TGCAGTCTGG GTTGTAATGG CTGGTGCATG TGTATTCTTG
CTCGGTTCAG CAATGGGGTT CTTCCAGGTC TTCCTAGAGA TGGATCCTTG TGAAAACTGT
GTCTATATCC GCTTTAGCCA GTTCTGCATC CTGATAGCCG GTGTAATGAT GATTGTAAAT
CCTAAGAACA AGGTGATTAA GGTAATAGGC CTTGCGCTAG CCTGGTATGG GATTGTCTAC
GGCATGGATA AGTCAATCAT ATTATCTGGT CAGCACGTAG CCTCACACGC CTCAGACTCT
GGACTTGACC TGTTTCAGTC TGGCCAAGGC GCTAATGCCT GCTCATTAGA ACCCACCTTC
CCACTTGGTT TGCCGCTTCA TGAATGGCTA CCGTTCGAGT TCGCTCCATC AGGTATATGT
GGTGAAGACG ACTGGGCGCT GTTCGGCCTC AACATGGCTC AGTACTGCAT CATCTCATAC
ACAGTCTTCA TAGCCTGCGC CTTACCTTTA ACCGTAGCTT TTATCACTAA GAGCTTAAGA
GGAGGGTCTT TTTTCACTAA GACCTTAAGA GAAAGCTAA
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| Protein sequence | MINKLKQWFA DLKAYPLLTL EATQEGRAVW VVMAGACVFL LGSAMGFFQV FLEMDPCENC
VYIRFSQFCI LIAGVMMIVN PKNKVIKVIG LALAWYGIVY GMDKSIILSG QHVASHASDS
GLDLFQSGQG ANACSLEPTF PLGLPLHEWL PFEFAPSGIC GEDDWALFGL NMAQYCIISY
TVFIACALPL TVAFITKSLR GGSFFTKTLR ES
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