Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3983 |
Symbol | |
ID | 5614147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4874266 |
End bp | 4874982 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640934937 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001475715 |
Protein GI | 157377115 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGATA GAAGAAGAGC CCTCAAACTA TTGGCTGGCG GTGCAATTGC TACAACTGGG GTAATGTTTA TACCTGCGGG CAGCGCGATT GCAGCCATTC GTCAACAGGG CAAAAAGCGA CTGGCCATGG TGATAGATCT TAGCCGATGC AATGGCTGTA AAGCATGCGT CGTCTCCTGT GGTATGGAAA ATGGCACCAA ACCCGATGAA CATCGCACCC AGGTTATTCA AACCAGTGCA GAAATTGGCA ATAAACAGTA CGCATTCAAT CTGCCAATCA TGTGTAACAA CTGTGAGACC CCCTCATGTG TGTCTGTTTG TCCGACGGGC GCGACATTCA AGCGCGAAGA AGACGGAATC GTCGTGGTGG ATTCTACGCT CTGTATAGGG TGTAACTACT GCATTCAGGC GTGCCCATAC GGCGGGGTTC GTTTCACTAA CTCGACAACC GGTACTGTAG ATAAGTGTAA CTTTTGCATT CAACGTACCT CCAGAGGCTT GCTGCCTGCG TGTGTCGAGA CCTGTACCGG TGGTGCACGT GTCTTCGGTG ATATTAACGA TGTTAATAGT GAAATATCCA AGCTGCTCAG CCAGAGTAAC CCTATGGTGC TGCAGGCGAG CAAACAGACT TCACCGAATG TTTTTTATAT TGGCTTGACG CAAGAAGAGA GCAACACCGC GTTCAGTATA CATTCTCCTC AATTGTGGCA GAGGTAG
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Protein sequence | MLDRRRALKL LAGGAIATTG VMFIPAGSAI AAIRQQGKKR LAMVIDLSRC NGCKACVVSC GMENGTKPDE HRTQVIQTSA EIGNKQYAFN LPIMCNNCET PSCVSVCPTG ATFKREEDGI VVVDSTLCIG CNYCIQACPY GGVRFTNSTT GTVDKCNFCI QRTSRGLLPA CVETCTGGAR VFGDINDVNS EISKLLSQSN PMVLQASKQT SPNVFYIGLT QEESNTAFSI HSPQLWQR
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